Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3473 |
Symbol | |
ID | 8545862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4798798 |
End bp | 4800567 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 646388141 |
Product | peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase |
Protein accession | YP_003267868 |
Protein GI | 262196659 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.385953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.182512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATC TCGTCGTCGG GGGAGGCAGG CGGCATCACC ACTCGCAGCG CAACCGACTG CGCAGCGTAG CCATCGCCGT CGGCCTCGGC CTCGTGAGTC TCCTGGTCGT GGCGTTGATG TTCGACCGCA TGGTCAGCTT CGTCGAGCCG GCCACCGAGG TGCCGGACCT GGCGCTTGAG GTCGAGGGCG ACCTGCGCGC GGGCGAGGCG CCGCGGCTGG TGTACGGCGA CAGCTCGCTG AGCCGGGTCG GCAGCCTGGC GGTGTTGCGG CTGCGCGGCG AGCCCGCGGC GTTGGGCACG GCTCACGGGC GACTGCTGGG ACGCCAGCTC GGCCAGCAGC AGGCGGCGCT GGCGCCGCTG CTCGACGCCG CGGTGCGCAG CGCAGGGTTT TTCGGACGCA TGACCCATAG CTGGCGCCTG CGCTGGCACT ACCGCGAGCT CGACGACGGC ATCCCGGGCC ATCAGCTCGT CGAGATGGCG CACCTCATCG CCGCGGCCAA GGCCCAGGGC GGCGCCGCCG ATGACGACGA CGCGCCGCCC GATGCCGGCG CGCTGTCGCT GCCCGAGTAC GAGGCCTTTG TGCGCGCGCA GGCCGCGCTC GACGCTGGCG CGGCCGCGCC CTGGTCCTCG GGCGCGAACT TCCGGGCGCT CACGCGGGCC ACCAGCGCCG TGGCCGCGGT GCGCGATCCC GGCGGCGATC GCATGCTCGT GACCCGCAGC TTGAGCCTGC CGGGCGCGGC CGATGGCGGC GACGCAGCGG CCGCCGCGCC GGTGGTGTTC TTCGTGCGCC CGCCCGGCGT CATCCCCTTT GCCAGCGTCG GCTGGCCGGG CTTGGTCGGC GTGCTCACGG GCGTCAACGC CGAGGGCATC GCGGTGTTCG TGCACCCGGC CTATGCCGCG GCCGAAGACT CGGTCGCCGC CGCGCAGCCC GCGGCGCTGT TGGCGCGCGA CATCCTCGAG AACACGCGCA CCCTCGACGA GGCGCTGGCG GTATTCGAGC ACGCCGAGAC CTTGGGCGCG CTCAGCTTTT TGCTCGTCGA TGGCCGCGCG CGCCGCTTTG CCGTGGTCGA GCGCAGCCGC GGGCGCACGG CCGTGCGCAA AGGGGAAGGC GGCGTGGTCA CCGACGTGTT CACCAGCGAC GCCTTTGCCG ACGACCCCGA GAACGACCGC GCCCGGCGCG TGCGTCCGGC CGACATGCGC GCGCGCCGCG CCGCCGCGCT TCTGGCCAAG CGGCCGAGCG GGCCCGAGGA CATGCTGGCG CTGCTGCGCG ACCAGCGCGA CAGCGGCGGC CGCCCCCTGC CCCTCGGTCA TCGCGGCGCG CTGCGCGACC CCAGCGCCGT GCACGCGGTG TTGCTCGACG TCTCGACCAT GGTCTTGTGG GTCGCCGACG GCCCCGACCC GGCCGCGCAG TTTAGGGCCT TCGACCTGCG CCACGAGCTC GGCGGCGGGC CGCCCGCGCC GCCGCCCGAC CTGCCGGCCA TGAGCGGCGC CGGTCCGCAC GAGAGCGACC GCGTGCGCGC GGCCCGCGCG CATCTGCGCG CCGCCCGCTA TCACGCCGCG CACGACGCCG CGGCCCTGGC CCGCGAGCAG GCCGCCCGCG CCCTGGCGCT CACGCCCGAC CTGCCCGAGG CGCTGCTCTT GGCCGGCGAC CTGGCGCGCG CGAGCGGCGA CAGCGACGCC GCCAAGCGCT TCTTCGGCCG CAGCCTGGAA GTCGGCCTCG ACGACCCCGG CGCCGAAGAA GAAATCCGCG CGCTCCTGGG CACGCCGTAG
|
Protein sequence | MTDLVVGGGR RHHHSQRNRL RSVAIAVGLG LVSLLVVALM FDRMVSFVEP ATEVPDLALE VEGDLRAGEA PRLVYGDSSL SRVGSLAVLR LRGEPAALGT AHGRLLGRQL GQQQAALAPL LDAAVRSAGF FGRMTHSWRL RWHYRELDDG IPGHQLVEMA HLIAAAKAQG GAADDDDAPP DAGALSLPEY EAFVRAQAAL DAGAAAPWSS GANFRALTRA TSAVAAVRDP GGDRMLVTRS LSLPGAADGG DAAAAAPVVF FVRPPGVIPF ASVGWPGLVG VLTGVNAEGI AVFVHPAYAA AEDSVAAAQP AALLARDILE NTRTLDEALA VFEHAETLGA LSFLLVDGRA RRFAVVERSR GRTAVRKGEG GVVTDVFTSD AFADDPENDR ARRVRPADMR ARRAAALLAK RPSGPEDMLA LLRDQRDSGG RPLPLGHRGA LRDPSAVHAV LLDVSTMVLW VADGPDPAAQ FRAFDLRHEL GGGPPAPPPD LPAMSGAGPH ESDRVRAARA HLRAARYHAA HDAAALAREQ AARALALTPD LPEALLLAGD LARASGDSDA AKRFFGRSLE VGLDDPGAEE EIRALLGTP
|
| |