Gene Hoch_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3472 
Symbol 
ID8545861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4796667 
End bp4797890 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content69% 
IMG OID646388140 
Productserine/threonine protein kinase 
Protein accessionYP_003267867 
Protein GI262196658 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.164804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.106507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTGTC CGATGTGCGA CGCAACCGTG GATGCGTCCA GCCGATTCTG CGGCGTCTGC 
GGTCACCGCT TCGATGATAC CGAGCAGAGC GTCGTGCAGA CCGACACGCA GGTGATGGGC
GCCCAGCAGG ACCCGTACCT CGGCGTGGTG CTCAACAACC GCTTCGTCAT CGAGTCGAAG
GTGGGCGAGG GTGGCTTCGG GGCCGTGTAC AAGGGCAAGC AGCTCGGCAC CGGCCGGGTG
GTGGCGCTCA AGCTCTTGCA TCCCGAGATC ACCCAGGACG AGAACCTCGA GGCGCGCTTT
CGCCGCGAGG GTTTGGTCAT GTGCAACCTG CGCGACGCGC ACACCGTGAC CACCTACGAC
TTCGATCAGA CCCCTGACGG CACGCTGTTC ATCGCCATGG AGCTGCTCGA GGGCCGCAGC
CTGCACGACG TCTTCTACAC CGAGGCGCCG CTCGAGTGGC GGCGCATGCT GCGCATCGTC
GAGCAGATGT GCACCTCGCT GGCCGAGGCC CACAGCCAGG GCATCGTGCA CCGCGACCTC
AAGCCCGAGA ACATCTACCT CGAGACCCGG CCGAGCGAGG CCGAGTTCGT CAAGATCCTC
GACTTCGGCA TCGCCAAGGT GATGCGCGGC GACGGCACGC AGACGCCGCA GCTCACGGCC
ATGGGCCAGA CCCTGGGCAC GCTCGAGTAC ATGTCGCCCG AGCAGCTCAT GGGCAAGGAG
CTCGACGGCC GCAGCGACAT CTACACCGTC GGCGTGCTGA TCTACGAGAT GATCACGGGC
CGGCTGCCGT TCCCCGACGC CAAGGGCCCG GCGGCCCTGA TCACGGCCCA GCTTCGCGAG
GTGCCCGAGC GGCCCTCGGT GGTCAACGCC GCCGGTCAGA TTCCGCCGAC CGTGGACGAG
CTGGTGCTCA AGATGCTGGC CAAGGACAAG GCCAAGCGCT TCGCCGACGT CAACGAGCTG
CGCGAGGCCG TTGCCGAGCT GCTGCGCTCG GGCGCCTGGC AGGACGGCAG CGACGTCGCG
CTGGGCGCGC TGCCGCCGTC GTCGGGCTCG GGGGCCGGGA TGCCCGCGGT GGCGCCGGCG
CCTCCGGGAG ATATGCGGGC GGTCGTGGCG CCGCGCAAGG CGCGGGCGCG CGGCCCGGTG
CTCGGCGGCG TGTGGCTGTG GGTGATGCTG GGGCTGATCG CGCTCGGCGG CCTGGTCGGC
GCGGCCCTGG CTCTGCAACA GTAG
 
Protein sequence
MKCPMCDATV DASSRFCGVC GHRFDDTEQS VVQTDTQVMG AQQDPYLGVV LNNRFVIESK 
VGEGGFGAVY KGKQLGTGRV VALKLLHPEI TQDENLEARF RREGLVMCNL RDAHTVTTYD
FDQTPDGTLF IAMELLEGRS LHDVFYTEAP LEWRRMLRIV EQMCTSLAEA HSQGIVHRDL
KPENIYLETR PSEAEFVKIL DFGIAKVMRG DGTQTPQLTA MGQTLGTLEY MSPEQLMGKE
LDGRSDIYTV GVLIYEMITG RLPFPDAKGP AALITAQLRE VPERPSVVNA AGQIPPTVDE
LVLKMLAKDK AKRFADVNEL REAVAELLRS GAWQDGSDVA LGALPPSSGS GAGMPAVAPA
PPGDMRAVVA PRKARARGPV LGGVWLWVML GLIALGGLVG AALALQQ