Gene Hoch_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3450 
Symbol 
ID8545839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4762024 
End bp4763559 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content71% 
IMG OID646388118 
Productanion transporter 
Protein accessionYP_003267845 
Protein GI262196636 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.502589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0319564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCACT CGGCCGCGGT GCACGACGAC CAACGACGAC CTGTCCGTTT TCCGCTGCCC 
CTGCGCAGCG CCATCGGCGC GCTGCCGACC ATGATGGTCG ACAGCCGGCG GGCGCTGGCC
GTGATGCTCG GCCGCCTCGA GATCCGCTCG ACGCGGCGGC TGGTGTCCTT TCTCGTGTGC
ATCGGCGTGG CCGCGCTGGT CACCTGGGTG GCGTCGATTC AGCCCGAGTC CGGACTGTCG
CCGGCCGGGC TGCGCGGCCT GTTCATCCTG GTGAGCGCGG CGCTGTTGTG GGTCACCGAG
GCGCTGCCCG CGTTCGCGGT CGGCATCCTG GTCATCGCCC TGGAGATCGC GCTGCTCGGC
GGTCTGGGCA AGGCTCCGCC GGTCCACGCA GCCGACTGGG AAGAGTTCGT GGTCGTGCTC
GGCCACCCGC TCATCTGGCT GTTCTTCGGC GGCTTCATCC TCGCCGCGGG CGCCGCCAAG
ACCTCGCTGG ACCGCCGCAT CGCCACCCGG CTCTTGCCGC TGCTCGGCAA CCAGCGCAAG
TGGATCCTGG CCGGCTGCAT GGGGCTCACC TTCGCGTTCT CCATGTTCAT GTCGAACACG
GCCACCACCG CCATGATGCT GGCGCTGCTG ACGCCGTTCC TGGTGACGCT GTCCGACGAC
GACCGCTACG CCCAGGGGCT GCTGCTCGGC GTGGCCGTGG CCGCCAACCT CGGCGGCATG
GGCAGCTTGA TCGGCACGCC GCCCAACGCC ATCGCGGTCG CGGCCGTGCA GCAGGCCGGA
GCCACGGTCA GCTTTCAGCG CTGGCTGCTC ATCGGCCTGC CGCCGGCGCT GCTGATGGCC
TCGCTGGCGT GGCTGCTGCT GGTGCGCCGC TACGACGGCC GCGGCACGCT CATCGGCCCG
GACGGCGGCT CGCCCATGGC GGCGCTGGAG AACAGCGGCG AGCCGCGCCT GCCGCGCTGG
CAGCGCTGGA CCATGGTCGT CACCTTCGTG GCCACGGTGC TCTTGTGGAT GACCGGCCAG
TGGCACGGGC TGCCCACGGC CATCGTCTCC TTCGTGCCCA TCGTCGCGCT CACGGCCACC
GGCATCCTCG GCCGCGAGGA CCTGCAGCGA TTGCCCTGGG ACGTCCTCTT CCTGCTCGCC
GGTGGCCTGG CGCTGGGCGA GATGGTGCAG AGCACGGGCG TGGCCACGTG GATGGTCGCG
CATCTGCCCG TGGGCGGCAT CGGCCCGTAC GGGCTGGCGC TGCTCATGGC GTACGTGTGC
GCGTTCCTGT CGAACCTGAT GAGCAATACC GCCGCCGCCA ACGTGCTGGT GCCCATCGGC
GTGACCCTGG CCAGCGGCTT CGAGGCGCAG ATCGCCATCC CCATCGCCAT GGGCGCGTCG
GCCGCCATGT GCCTGCCGAT CTCGACGCCG CCCAACGCGC TGGTGTACGC CAGCGGGCGG
CTGCCGAGCC GGGACTTCGT CGCCATCGGC GTCGGCATCG GTCTGCTCAC GCCCGTGATC
GGCGTGGCCT GGATGAACCT GGTCGGCCTC GGCTGA
 
Protein sequence
MIHSAAVHDD QRRPVRFPLP LRSAIGALPT MMVDSRRALA VMLGRLEIRS TRRLVSFLVC 
IGVAALVTWV ASIQPESGLS PAGLRGLFIL VSAALLWVTE ALPAFAVGIL VIALEIALLG
GLGKAPPVHA ADWEEFVVVL GHPLIWLFFG GFILAAGAAK TSLDRRIATR LLPLLGNQRK
WILAGCMGLT FAFSMFMSNT ATTAMMLALL TPFLVTLSDD DRYAQGLLLG VAVAANLGGM
GSLIGTPPNA IAVAAVQQAG ATVSFQRWLL IGLPPALLMA SLAWLLLVRR YDGRGTLIGP
DGGSPMAALE NSGEPRLPRW QRWTMVVTFV ATVLLWMTGQ WHGLPTAIVS FVPIVALTAT
GILGREDLQR LPWDVLFLLA GGLALGEMVQ STGVATWMVA HLPVGGIGPY GLALLMAYVC
AFLSNLMSNT AAANVLVPIG VTLASGFEAQ IAIPIAMGAS AAMCLPISTP PNALVYASGR
LPSRDFVAIG VGIGLLTPVI GVAWMNLVGL G