| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3410 |
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| Symbol | |
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| ID | 8545798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4708393 |
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| End bp | 4709457 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646388077 |
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| Product | isopentenyl-diphosphate delta-isomerase, type 2 |
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| Protein accession | YP_003267805 |
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| Protein GI | 262196596 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.267786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.127864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTC CGCCGATTTC CCAGCGCAAG TCCGATCACA TCGAGGTCGC AGCCAGCGGC
CAGGCCGACT TCGAGCGCCG CACGACCCTG CTCGAAGAGG TGCAGCTCGT CCATCAAGCC
CTGCCCGAGC TGGCCGTGGA CGAGATCGAT CTGCACACCA CGCTGTGCGG GCTGCCGTTG
CGCGCGCCCG TCGTCATCAG CGGCATGACC GGGGGCACCG CCGAGGCCGC CGCCATCAAC
CGCGACCTGG CGCGCGCGGC CGAGGGCGCG GGCGTGGGCT TTGGCGTCGG CTCGCAGCGG
GCCATGGCCC TGCACCCCGA GCTCGAGGAC ACCTTCCGCG TGCGCGACGT GGCCCCCGAC
GTGGTGCTCA TCGGCAACAT CGGCGTGGTC CAGGCGCGCG AGATGGGCGT GGCAAAGGTG
GCCGAGCTGG CCAAGCGCAT CGAGGCCAAC GCCATGGCCG TGCACCTCAA CCCGGCCATG
GAGCTCATCC AGGGCGACGG CGACCGCGAC TTCCGCGGCG CGATCGACAC GGTGGCCGCC
CTGGTGGACG CGCTGCGCGT GCCCGTCATC GCCAAGGAGA CCGGCTGCGG GCTGTCGCCG
CAGGCGGCCG CGGCGCTGGC CAAGGTCGGC GTGCGCACGG TCGACGTGAG CGGCGCCGGC
GGCACCTCGT GGGTGGCGGT CGAGGCCCGG CGCGCGGCCG AGGGCAGCGC GGCGCAGCGC
CTGGGCCAGG AGCTGTGGGA CTGGGGCATC CCGACCGCGG TGAGCACGGC CGCGTGTGCC
GCCCACGGCC TCGAGGTGAT CGCCACCGGC GGGCTGCGCT CGGGGCACGA CATCGCCCGC
GCCATCGCCC TGGGCGCGCG CTGCGGCGGC CTGGCAGCGC CCGTGCTGCG GGCCCAGCGC
GCCGGCGGCT ACGAGGGCGC GGCCGCCTAC GTCGGCGAGC TGGTGGCCTC GCTGCGCTCG
GTGCTGCTCC TGTGCGGCTG CGCCGATCCC GGCGCGCTCG CCCACGCGCC TCGGCGCCTG
GGCCCGGAAC TGCGAGGATG GCTCGATGAC CTGGGCATTC GGTAA
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| Protein sequence | MSSPPISQRK SDHIEVAASG QADFERRTTL LEEVQLVHQA LPELAVDEID LHTTLCGLPL
RAPVVISGMT GGTAEAAAIN RDLARAAEGA GVGFGVGSQR AMALHPELED TFRVRDVAPD
VVLIGNIGVV QAREMGVAKV AELAKRIEAN AMAVHLNPAM ELIQGDGDRD FRGAIDTVAA
LVDALRVPVI AKETGCGLSP QAAAALAKVG VRTVDVSGAG GTSWVAVEAR RAAEGSAAQR
LGQELWDWGI PTAVSTAACA AHGLEVIATG GLRSGHDIAR AIALGARCGG LAAPVLRAQR
AGGYEGAAAY VGELVASLRS VLLLCGCADP GALAHAPRRL GPELRGWLDD LGIR
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