Gene Hoch_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3402 
Symbol 
ID8545790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4700647 
End bp4701672 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content75% 
IMG OID646388069 
ProductABC-type phosphate/phosphonate transport system periplasmic component-like protein 
Protein accessionYP_003267797 
Protein GI262196588 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.827009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.213814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC GCTCGCGCGG GCCGAGCCGC GGACGCGCGC GTCTGCGGCG ACGCTTGGTC 
CAGGTGTCCG AATACGTCGG CCGCGAGGGC CTGGGTCCGC TGCCGCTGCT GCTGCTGGCG
CTGGCGCTGG CGTGCGCGCT CGGGGCAGGC TGCGACAGCG GCCCGCGCAG CGACAGCGCG
CCGCCGGGCG CGGTGGCCAA CGCCGGGGCG CCGACGCTGG CCAACGCGTT TCGCCGCCGC
GGTAAGGCGC GGCTGCGCGT GGGCGTGCAC ACCTGGGAGC TGAGTTCGCG TGTGGACCAG
GACTACGCCG CCATCGCGCA GGCCTTCGAG CAGGCGCTGG GCGCGATCGG GCAGCCGAGC
GCGGTGGATA TCGAGCCCTT TGCGGTCTAC GGCGAGCTGA CCGAAGCGCT GCTGGCCGGG
CGCATCGACG TCGCCCGGCT CGAGTCCGCG ACCTATCTCG AGGTGCGCGA GCGCGGCCAG
TTGCCGCTGC TGGCGCTCGA GCAGCCGGCG ATGGCCACGC CGCGGCGCGC GGTGGTGGTG
ACGGCGGCCG ACAGCGCCAT CGCGTCACTC GCGGACGCGC GCGGCCACAG CTTCGCGTTT
GGCGACCAGC GCACGGCTGT GGGCCGCTAT CTGCCGCAGG CGGCCCTGCG CGAGGCCGGG
GTCGAGGCCG AGGCGCTGTC GCGCAGCCGC TACATGCGCC GTCCCGACAA GATCGCGGCC
GCCGTACGCC TGGGCGAATA CGATCTCGGC GTGCTGAGCT ACGCGCTCTA CCGTCGCGAG
GCGCGCGCGG GCACGCTGCG GGTCGTGGCC ACCATCGACG ATGCGCCCCA GCCCTGGGTG
GCGCGGCGCG GGCTCGAGCC GAGCTTGCTG CGCGGTCTGG CGGATGCCCT GCAGGCGATG
GATGCCTCGC GCTCGCTGCG CTCGCTGGGG ATCGTCGGCT TCACCGCGCC GGACGCCAGC
GTCTACGAGC CGGTGCGCGC GGCCAAACGA GCGGCCGCTG CCTTCGGGCC CGGGACCGCG
CGCTGA
 
Protein sequence
MPERSRGPSR GRARLRRRLV QVSEYVGREG LGPLPLLLLA LALACALGAG CDSGPRSDSA 
PPGAVANAGA PTLANAFRRR GKARLRVGVH TWELSSRVDQ DYAAIAQAFE QALGAIGQPS
AVDIEPFAVY GELTEALLAG RIDVARLESA TYLEVRERGQ LPLLALEQPA MATPRRAVVV
TAADSAIASL ADARGHSFAF GDQRTAVGRY LPQAALREAG VEAEALSRSR YMRRPDKIAA
AVRLGEYDLG VLSYALYRRE ARAGTLRVVA TIDDAPQPWV ARRGLEPSLL RGLADALQAM
DASRSLRSLG IVGFTAPDAS VYEPVRAAKR AAAAFGPGTA R