Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3392 |
Symbol | |
ID | 8545780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4688518 |
End bp | 4689189 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646388059 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_003267787 |
Protein GI | 262196578 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0363447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.327167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGACT GGCTATCCGA AATTTTCCAG ACAGGTGGGC CGTTCTTCAT CGTCAACACC TTCTTCCTGG CGGTGGTGTT GGCCATCATC GTCGAGCGCG CCATCTACTT CCTGGGCCGC GGGCACATCA ACGCCAAGGC CTTCCTCGAG CAGATCAAGC GCCTGCTCGC GGCCAACAAG ATCGATCGCG CCAAGAAGCT GTGTGACGCC ACCACCGCCC CGGTCGCGCG CGTGGCCAAG GCCGGCCTCA ACCGCATCCA TCGCGGCGAG GCCGCGGTCG CCCAGGCCAT GGAAGAGACC ATGGTCGATG TCACCCCGGA GGTGAAGACG CGCATCTCGG CGCTGTGGTC GATGGCCAAC ATCGTCACGC TCACCGGACT GCTCGGCACC ATCACGGGCC TCATCAACAC CTTCTCCGCG GTCGCCGAGT CCAACCCGGC CGACCGCCAG CGCAACCTGT CCCTCGGCAT CTCCGAGGCC ATGTACAACA CCGCCTACGG GCTGAGCATC GCGCTCATCT GCATGCTCGC CCACCTGATG CTGAGCACCG CCATGAAGCG CGTGGTCGGC GATCTCGAGT CGTTCTCGCT GCGCCTCGAG AACATGCTCG GCGAGGGCGG CGCCGTCTCG TCGAGCCGCG GCGTGGCCGG CCCCGGGGAC GCGGCCGAGT GA
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Protein sequence | MWDWLSEIFQ TGGPFFIVNT FFLAVVLAII VERAIYFLGR GHINAKAFLE QIKRLLAANK IDRAKKLCDA TTAPVARVAK AGLNRIHRGE AAVAQAMEET MVDVTPEVKT RISALWSMAN IVTLTGLLGT ITGLINTFSA VAESNPADRQ RNLSLGISEA MYNTAYGLSI ALICMLAHLM LSTAMKRVVG DLESFSLRLE NMLGEGGAVS SSRGVAGPGD AAE
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