Gene Hoch_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3382 
Symbol 
ID8545770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4678924 
End bp4680618 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content73% 
IMG OID646388049 
ProductFHA domain containing protein 
Protein accessionYP_003267777 
Protein GI262196568 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.154424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAGCG CGGCGCCCTG GTTGCGCGTC GACCGGGTCG AGGCCGAGCC CAGCGTGTTC 
CCCGATCTGG CGCGGCTGCA GCTCTTCGTG ACGGCGGTCG ATCTGCACGG GGTCATCCTC
GGCGATCTCA CCGGCGAGCG CGATTGGAAG CTCGAGATCG CCAGCAAGGC GACGCGGGCG
CCGCTACTGC TCGGCACCTT CGCCGGGCTC GAGCACGAGC TGGCGGTGGC GCTGGTGATC
GAGACCGGCG CGCCCTTTGC CGAGGCGCTG CCGGCGATCC GCCAGCAGGC GCTGGAATTT
CTGCAAAAAC TGCCGCGCGA CGCCCGCGTG GTGGTGGTCG GCTATGACGA CGAGGTCCAC
GCCAGCCGCC GCGTCGGCGA TGTGGCGCGC GCGCGCCGCG ACATCGAGGC GCTCGAGATC
AACCCGCTGT CCACCGAGTT GCAGCTCATC GAGGCGGTCA ACCGCGCCCG CGACACGCTG
GCGCGGCTCG AGCCCGAGCG CGAGGGCGTG CCCATGCGCA AGCTCATCGC CGTGGTCTCC
GATGGCCGCG ACGCCGATCC CAGCCCCGAG AACTACCGCC GCGTGGCCAA GCGCGCGGCG
CGCAACGACA TCCGCATCCA CACCATCGGC TTCCCGGCCG ACCGCAACCG CTATCCGCTC
TACGGCCTGG CCGAGATGTC CAAGCAGAGC GAGGGCACCT TCCGCCTGGT GCTCACCGAG
AGCGCGTTCG GCAGCCACTT CGGCCAGCTC GCGCGCGAGA TCAACGAGCA GTATGTGCTC
ACCTATTTCC TGCCGGCCGA GGACATCGAG CGCAAGCGGG TCGAGCTGCA CGCCGGCGGT
ATGGTGTCGA ACAGCCCGCG CGTACCCGCG GTGGAGTGCG GAGGCGAGAG CTGCGAGGCC
GGCCAGATGT GCGTCGCCCG GCGCTGCACC ACGCCGCCCC AGGCCAGCGG CGGCGGCTTT
TTCGGGGTGC TGGCCAGCAT CGCCGGTGTG CTGTTCGGGC TGCTGGTGCT GGTCGGCCTG
GTGGGCGTGA TCATGGGCCT GGTGCAGAAG CGCCGCAAGG CGGCTGCCGC GGCCGGCGAG
GCGCCGGCGC CGGCTCCGGG CGAGGGTGAG GCGGCCGGTG AGCCCGCGGC CGAGGCCGCG
CCCGCGGTGC AGCGCGTGGT CGCCTACGAC GCCCACGGCC GGCCCATCCA GGCGCCCGCG
CACGGGCGCG CGGGGTCGCA CGCCGATGTC GCCGCGGCCG GGGCCTCGGC CTCGTGGGGC
CACGCGGCGG CCGGCGGCGC CGGCGCCAGC GCCGGGTTCC AGGCCGCGGC CCACACCGGC
AACCACCAGG CCTACGCCGG CCAGCAGAAC ACCGGCCAGC ACCGCGCGGC CGCGCAGCAC
ACGGGCCAGC ACCACACCGG TCCGGCGCCC AGCCTGCTCA TCCTCAGCGG TCCGCGCCAG
GGTCAGCGCG TGCCGCTGCA TCACGGCTTC GTCATCGGCA CGGCCCAGGG CTGCCACCTG
CTGCTGCAGG GCGACACATT CGCCTCCAGC CACCACGCCC ACGTGCTCAT GGACACCGCC
GGCGGCTGTG TGCTGGTGGA TCGCGACTCC ACCAACGGCA CCTATGTCAA CGGCGTGCGC
ACCCGCGAGA AGCGGCTGGC GCATGGCATG CTGATCAAAA TCGGCGCGAC CGAGGCCCGG
TTCTTGACCC AATGA
 
Protein sequence
MASAAPWLRV DRVEAEPSVF PDLARLQLFV TAVDLHGVIL GDLTGERDWK LEIASKATRA 
PLLLGTFAGL EHELAVALVI ETGAPFAEAL PAIRQQALEF LQKLPRDARV VVVGYDDEVH
ASRRVGDVAR ARRDIEALEI NPLSTELQLI EAVNRARDTL ARLEPEREGV PMRKLIAVVS
DGRDADPSPE NYRRVAKRAA RNDIRIHTIG FPADRNRYPL YGLAEMSKQS EGTFRLVLTE
SAFGSHFGQL AREINEQYVL TYFLPAEDIE RKRVELHAGG MVSNSPRVPA VECGGESCEA
GQMCVARRCT TPPQASGGGF FGVLASIAGV LFGLLVLVGL VGVIMGLVQK RRKAAAAAGE
APAPAPGEGE AAGEPAAEAA PAVQRVVAYD AHGRPIQAPA HGRAGSHADV AAAGASASWG
HAAAGGAGAS AGFQAAAHTG NHQAYAGQQN TGQHRAAAQH TGQHHTGPAP SLLILSGPRQ
GQRVPLHHGF VIGTAQGCHL LLQGDTFASS HHAHVLMDTA GGCVLVDRDS TNGTYVNGVR
TREKRLAHGM LIKIGATEAR FLTQ