Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3378 |
Symbol | |
ID | 8545766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4674594 |
End bp | 4675556 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646388045 |
Product | ABC transporter related protein |
Protein accession | YP_003267773 |
Protein GI | 262196564 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.136347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGAGG TCCTCACGGT GCGCGGTGCC CGCAAGCGCT ACGGCGAGGT CGAGGCCCTG CGAGGCGCGG ATCTAGCGCT GCGGCGCGGG CACTGGGTCG GTCTGCTCGG CCCCAACGGC GCCGGCAAGA CCACGCTGGT GCGCGCCATC GCCGGGCGCG TGCGCCTCGA CGCCGGCGAG CTGACGCTGC TCGGCTCGGC GCTGCGTGCG AACAATCGCG CGGCCCGCGT GGCCCGGCGC CGCATGGGCG TGGTGCCCCA GGATCTCGCG CTCTACGAGC GGCTCACGGC GCGCGAGAAT CTGGCGGTCT TCGGCCGCTT CCACGGCGTC ACCGGCAAGG CGCTGCGCGA GCGCATGAGC TGGGCGCTGG CGTGGATCGG CCTGGCCGAG CGCGGCGACC ACCGCGTCGG CGGCTTCTCG GGCGGCATGA AGCGCCGCCT CAACATCGCC TGCAGCGTGC TGCACCGGCC CGATGTGCTG CTGCTCGACG AGCCCACGGT CGGCGTCGAT CCCCAGAGCC GGCAGCGCAT CTGGGACATG CTCGAGGAGC TGCGCCGGGC CGGCACCTCG CTGCTGCTCA CCACCCACCA CCTCGATGAG GCCCAGCAGG TGTGCGAGGA CATCGTCATC ATCGACCACG GCCGGGTCAT CGCCTCGGGC ACGGTCGAGA CTCTGATCGC GCAGACCCTG GGCACCGGCC GCAGCGTGTC GCTGGCGCTC GATCCCGCGC CCAGCCCCGA GGCCGTGAGC GCCGCCGAGG AGACGCTCGC GGCCGCCGGC ATCGACGATC TCGTGCGCCA CGGCCACCTG CTGCGCTGCA CCGCCGGCGA CGTGGCCAAC GCCCTGCCCG CGCTGCTGCG CTACTGGACC GAGGCCGGCC ACAGCATCGG CGATCTCGAG GTCTCGCCGC CGAGCTTGCA CACCGTGTTC TTGCACCTCA CCGGCCAGGA GCTGCGCGAG TGA
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Protein sequence | MHEVLTVRGA RKRYGEVEAL RGADLALRRG HWVGLLGPNG AGKTTLVRAI AGRVRLDAGE LTLLGSALRA NNRAARVARR RMGVVPQDLA LYERLTAREN LAVFGRFHGV TGKALRERMS WALAWIGLAE RGDHRVGGFS GGMKRRLNIA CSVLHRPDVL LLDEPTVGVD PQSRQRIWDM LEELRRAGTS LLLTTHHLDE AQQVCEDIVI IDHGRVIASG TVETLIAQTL GTGRSVSLAL DPAPSPEAVS AAEETLAAAG IDDLVRHGHL LRCTAGDVAN ALPALLRYWT EAGHSIGDLE VSPPSLHTVF LHLTGQELRE
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