| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3368 |
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| Symbol | |
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| ID | 8545756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4657750 |
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| End bp | 4659261 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388035 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_003267763 |
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| Protein GI | 262196554 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00879958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.135189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAC GCGACTCGCG AACGATCAAA GATCAAGTCG CCGTTGCCCG TGACAAGGGC
AAGCTGAAGC AAGCCCTCAA GGGCTATCTC GAGCTCGAGC AGATCGAGCC CGAGGACGGC
GAGTGGGCCC GGCGCGCGGC GGACATGTAC CGCCGGCTGG GCAACGACAA CATGGCGGTA
GCGGCCCTGG AGCGGGCCGT GGACAAGTAC GTGCGCGCCG GCTTCCTGGT CAAGGCGATC
GCTGCCTGCA AGATGATCTT GCAGATCGAT CCCTCGCACT CGGAGATCCA GCAGCGGCTC
ACGGCGCTCG ACGTCGAGCG CACGGGCGTG GGTGGCCCGG TGGGCATCGC CTCGCCCGAG
AAGCCCATCG AGCCGGTGCC GATCCGGCGT CGCTCGGGGC GGCGCACGCT GCCGCCGGGG
GCGCCGCTCG ACCAGGTCAA CCTGGGCGAG GTCGTGCCCG GGGCGCGCCA GGAGGTCGAC
GCCCGCGGCG AGGACTCGGG CGTGTTCGAG ATTCCGATCG ACGAGGACAG CGGCGTCATC
GTCATCGACG ACATGGATCT CGTCGACATC GAACTGGAGG ACGACGACGA GGAGGAGACC
CGCGACCACG GTGGCGCGCC GGCAGCGGTG GCGGCACCGG CCGCGGCGCC GCTGAGCGAG
GGCGCGCGGC GGGCGCTGCA CGAGACCCCG CTGCTGTCGT CGTTGGGCCC GGACGCCATG
CAGCGGCTGG TGGCCGAGGT CGAGCTGGTG CAGCTCGAGC CCGGCCAGGT GTTGTTCCGT
CAGGGCGACG CCGGCGATGC CCTGTACGTG GTCGCCGAGG GCTCGGTCTC GGTCATCGCC
GAGGGCCCGC CGCGGGTCGA GCTCAGCAAT CTGGGCGAGG GGCAGTTCTT CGGCGAGCTG
GCCCTGGTCA CCGACCAGGT GCGCAACGCC ACCATCGAGG CGCATCCGCA GACCGGCGCC
TCGCTGCTGG CCATCGCGCG CGAGGTGATC AGCGACGTTA TCGACGAGGA GCCGGCGGTG
TTGCAGGCGC TCTTGCGCTT CTTGCGCGAC CGTCTGGTCG ACAACCTGGT CGCCAGCAGC
CCGCTGTTCG CGCCCTTTGC CGGCGACGAG CGGCGCGAGC TGGCGGGGCG TTTTCGCTTC
CTCGAGGTCA AGCCGGGAGC GTTGATGATG GAGCAGGGCG CGCGCGCCCA TGGCTTCTAC
ATCCTCCTGG CCGGCGAGCT CGAGGCGTTG TATCGCGAGG CCGCGGGCGC GCGCGGGGTT
GGTCATCTGC GGCCGGGCGA CGTCTTTGGC GAGATGTCGC TGCTGTCGCA CGCGCCGGCC
GAGATCACGG TCCGGGCGGT GACCAAGTCG TTCTTGCTGG AGCTGCCGGC GAACACCTTC
CGCGAGGTGA TCATGACCCA TCCGCAGGTG CTGATGATGG TCTCGGATCT CGCCGACAGC
CGCCGGCACG CGCTCGAGCA GGTGTTGTCC GGGCAGGGCG AGTACCCGAC CGGCGGCATG
CGCCTGGTCT GA
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| Protein sequence | MARRDSRTIK DQVAVARDKG KLKQALKGYL ELEQIEPEDG EWARRAADMY RRLGNDNMAV
AALERAVDKY VRAGFLVKAI AACKMILQID PSHSEIQQRL TALDVERTGV GGPVGIASPE
KPIEPVPIRR RSGRRTLPPG APLDQVNLGE VVPGARQEVD ARGEDSGVFE IPIDEDSGVI
VIDDMDLVDI ELEDDDEEET RDHGGAPAAV AAPAAAPLSE GARRALHETP LLSSLGPDAM
QRLVAEVELV QLEPGQVLFR QGDAGDALYV VAEGSVSVIA EGPPRVELSN LGEGQFFGEL
ALVTDQVRNA TIEAHPQTGA SLLAIAREVI SDVIDEEPAV LQALLRFLRD RLVDNLVASS
PLFAPFAGDE RRELAGRFRF LEVKPGALMM EQGARAHGFY ILLAGELEAL YREAAGARGV
GHLRPGDVFG EMSLLSHAPA EITVRAVTKS FLLELPANTF REVIMTHPQV LMMVSDLADS
RRHALEQVLS GQGEYPTGGM RLV
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