Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3358 |
Symbol | |
ID | 8545746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4647715 |
End bp | 4649511 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646388025 |
Product | hypothetical protein |
Protein accession | YP_003267753 |
Protein GI | 262196544 |
COG category | [S] Function unknown |
COG ID | [COG4402] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03382] Myxococcales GC_trans_RRR domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0055195 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.200349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTCCT CGCCTCGCCT CGTCCTCGCC GCCTCGCTCG GCCTCGCCGG CGCGCTCGCC CTGAGCGCGG CCAGCGGCCT CGCGCCGGTC CCTAGCGCCC ACGCCTGCGG CTGCTTTGCC CAGTCCAACC CCACCGTGCC CGTGGTCCAG GGCGGCGAGC GCATCGTCTT CGCGGTGGAG GATGGCGTGG TCACCGCCCA CGTGCAGATC CAATACAGCG GCGCCGCCGA GGAGTTCGCC TGGCTGGTGC CGCTGCCGGC CGTGCCCACG CTCGACATCG GCACCGACGA GCTGTTCACC ACGCTGCTCT CGGCGACCAC GCCGCGCTAC CGCGCATCGC TCGATATCGG CGAGTGCGGC CCGGTCTCGT CGCCGGGGCC GACGCCGCCA CCGCCACCGG GCGATGACGA TCTGGTCGTC GGCCGCGAGG TGGTCGGCCC CTTCGAGACC GCGATCCTGC GCGCCGACGA AAAACAGCCT TTGCTCGACT GGCTGTCCGA TAACCGCTTC TTCGTGCCCG CCGGCACCGA CGCGATCATC GACCCCTACA TCAAGGAGGG CGCCTACTTC CTGGCGCTCA AGCTCGCGAC CGGCAACGAC GCCGGCGATC TCCAGCCCAT CGTGTTCTCC TACGCCTCGG AGCTGCCCCA GATCCCGATC GTGCTCACCA GCATCGGCGC CGAACCCGAC ATGCCCGTGG TGGTCTGGGT GCTGGGCGAG CACCGCGCGG TCCCGCGCAA CTTCGCCCAC GTGGTGCTCA ACGACGCGCG CATCGACTGG ATCACCAATG GCAGCAACTA CCTCGAGCTG GTCTCCGAGG CCATCGACGA GGCCGACGAT CACCACGCCT TCGTCACGGA GAACGCGGGC ACGATCAACT CGCTGCGCGG CCAGCTCGAT CCCGACGGCC GCTTCGGCGA CCGCGCGCTT CTGCGGCAGA TCGACGACCC CGCCGCGTAC CTCGAGTACC TGTTCGAAAA CGGCTACACG CAGCCGGCGG CGCCCGGCAC CGTGACCCTC AGCACCCAGC TCATCTCGCT GCTCGACGCC CACCTGCCGC TGCCCCAGGA GCTGGTCGAT GCGGTGAGCG AGGACAGCGG CGTCACCATC GGGCCCGGCG ACCTGTACAT CGCGTACCGC GACTATCGCG AGCAGTATCC CGATATCGTC GGCCCGGCGC ACGCCGACTT CGACCCCGCC GCGCTCACCG ATCTGCTCGA GGAGCGCGTC GTCGAGCCCA CCTTGGCCGC GGGCCAACTG TTCCGAGACC ACAATTACAT CACGCGCCTG TTCACGATGC TGTCGCCCGA GGAGATGACC AAAGACCCGG TGTTCAGCTT CAACCCGGAC CTGCCCACGG TCTCGCGCTC CCACTCCGCC TCGCGGCTGG TGCTCGAGTG CGACGTGGAG TACTACAACT ACCCGAACAC CGACGGGCCC GGCCTGCTCA CGACCGAACA GGGATGGGAG CTCTTTGTGC CCCGCCTCGG GGAGAATGAC TGGGTCGACG TGGAGATGCC GGCGAGCCTG CGCATCGAGA TACTGCGCGA GGAGGGCGCG CCGGTGACCG TGGTCGATAA CAGCGCGCTC ATCGCCGAGC GCATCGCGGC GTATCGCACG CTGCCGCCCG AGTACCTGCC CTCCCCCGAT CCGGTTGACC CGGTTGACCC AGTGGACGAG GACGACGCAG GCGGCTGCTC GACGAGCCCG AGCCGCGCGC CCGCAGGTGG CGCCCTGGTG CTCGCCGCCG GGGTGCTGCT GAGCCTGCGC CGCCGCCGCG CTCGCGTCCG GGCCTGA
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Protein sequence | MPSSPRLVLA ASLGLAGALA LSAASGLAPV PSAHACGCFA QSNPTVPVVQ GGERIVFAVE DGVVTAHVQI QYSGAAEEFA WLVPLPAVPT LDIGTDELFT TLLSATTPRY RASLDIGECG PVSSPGPTPP PPPGDDDLVV GREVVGPFET AILRADEKQP LLDWLSDNRF FVPAGTDAII DPYIKEGAYF LALKLATGND AGDLQPIVFS YASELPQIPI VLTSIGAEPD MPVVVWVLGE HRAVPRNFAH VVLNDARIDW ITNGSNYLEL VSEAIDEADD HHAFVTENAG TINSLRGQLD PDGRFGDRAL LRQIDDPAAY LEYLFENGYT QPAAPGTVTL STQLISLLDA HLPLPQELVD AVSEDSGVTI GPGDLYIAYR DYREQYPDIV GPAHADFDPA ALTDLLEERV VEPTLAAGQL FRDHNYITRL FTMLSPEEMT KDPVFSFNPD LPTVSRSHSA SRLVLECDVE YYNYPNTDGP GLLTTEQGWE LFVPRLGEND WVDVEMPASL RIEILREEGA PVTVVDNSAL IAERIAAYRT LPPEYLPSPD PVDPVDPVDE DDAGGCSTSP SRAPAGGALV LAAGVLLSLR RRRARVRA
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