Gene Hoch_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3345 
Symbol 
ID8545733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4627300 
End bp4628553 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content68% 
IMG OID646388012 
Productcyclic nucleotide-binding protein 
Protein accessionYP_003267740 
Protein GI262196531 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.254717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACT TTGCCAGCGG AGCAACCGAT ACCGGCCGCG TGCGCAGCCG CAACGAGGAT 
TTCTTTCTCG TCGATGAACC GCTGGGCCTG TACCTGGTGT GCGACGGCAT GGGCGGGCAC
AGCGCCGGCG ACGTCGCCAG TCAGCTAGCG GCCGAGCGCG TGCGCGACAC CCTGCGCGAG
TACACGGCCC TGATCCGCAG CTACACCGAG GATCCCAAGC ACCGCACCCG GCGCAAGATG
CGCGGCTTGC TCGACAAAGC CGTGCAGAAC GCGTGCACCC TGGTATGGAA CGAGGCCACC
AAGGACAAGG GCAAGCAGGG CATGGGCACC ACCTTGGCCA TGCTGCTGGT GTGCGGCCCC
AACGCCTTCG TCGTCCACGT GGGCGACAGC CGCGTGTACC TGGTGCGCGG CCGCACCCTG
TGCCAGCTCA CCGAGGATCA CACGCTGATC AACGACATGG TCCGCCACGG CATGATCACG
CCGGAGAAGG CCGCGGTCCA TCCCCACAAG AACGCGCTGA CCCGGGCCAT CGGCATCCAG
GAGGCCGTGC ACGCCGACAT CCTGCACGTC GAGGTCATGC TCGGCGACCG CTTCCTGCTG
TGCTCCGACG GGCTCACCAA GCACCTCAGC GGCCAGGAGA TCTTGGCCAC CGTGGTCAAG
CTCGGGGCCG ACGAGGTGAC GGCCGCGCTG CTCAAGCGCA CCAACGCGCG CGGCGGCAGC
GACAACGTCA CCGCGGTGCT GGTCGGGGCC GACGAGGGCG CGGCCGGGGC GCCGCAGAGC
GAGCACAACA CTATCGTCGC CGCCAAGATC GATACGCTGC GGCGCATCCC GATGTTCGCC
GGCTTCGAGT ACAAGCAGCT GGTCAAATTC CTCGAGATCG GCGAGGTGCG CACGGTCGAG
AGCGGCGAGA CCGTGATCCG CGAGGGCGAG GAGGGCGCGA CCATGTACGT CATCTTGTTC
GGACAGGCGG ACGTCTTCCG CGGAGGCGCC CGGGTCAACA GCCTCGAGCC CGGCGACTAC
TTCGGCGAGA TGAGCCTCAT CGACAAGGTG CCGCGCTCGG CCACCGTGGT CACCAGCGCG
CGCACGACCT TTCTCACGCT CGAGCGCGAG CGCTTCTTTG CTCTCACCCG CAGCGACGCC
GGCATCGCCA CCAGCGTGTT CTGGTCGCTG GTGCAGAAGC TCAACAGCCG CCTGCGCCGC
GCCGACGACG AGGTCCATCG GCTCAAGCAG TCGCTGGAGG GGGAGCAGGC CTGA
 
Protein sequence
MKYFASGATD TGRVRSRNED FFLVDEPLGL YLVCDGMGGH SAGDVASQLA AERVRDTLRE 
YTALIRSYTE DPKHRTRRKM RGLLDKAVQN ACTLVWNEAT KDKGKQGMGT TLAMLLVCGP
NAFVVHVGDS RVYLVRGRTL CQLTEDHTLI NDMVRHGMIT PEKAAVHPHK NALTRAIGIQ
EAVHADILHV EVMLGDRFLL CSDGLTKHLS GQEILATVVK LGADEVTAAL LKRTNARGGS
DNVTAVLVGA DEGAAGAPQS EHNTIVAAKI DTLRRIPMFA GFEYKQLVKF LEIGEVRTVE
SGETVIREGE EGATMYVILF GQADVFRGGA RVNSLEPGDY FGEMSLIDKV PRSATVVTSA
RTTFLTLERE RFFALTRSDA GIATSVFWSL VQKLNSRLRR ADDEVHRLKQ SLEGEQA