Gene Hoch_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3344 
Symbol 
ID8545732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4626626 
End bp4627051 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID646388011 
ProductUspA domain protein 
Protein accessionYP_003267739 
Protein GI262196530 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.225845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CCATCCTGTT TGCCAGCGAT TTCTCCAATC TCACCGATCG CGCGCAGAGC 
TACGCGCTCG ACCTGGCCCG CGCCACCGGC GCCAAGGTGA CCCTCATCCA CTCGGTCGAG
CCCATCGAGG GCGCGGGCGA TGACGAGTAC GTGGCCAAGC TCCTGGAAGG CCGGGTCCAG
GACGCGCGCT CCAAGTCCCA GAGCGTGGTC GCCGCCTTCG AGGAGGCCGA GATCGCGTGC
GACGTGCGCG TCGAGGTCGG CAAGCGCTGG AAGGCCATCG TCGATGCCGC CAGCAGCGGC
GACTACGACC TGGTCGTGCT CGGCTCGCAC AAAATCAACG ACGGCGACAA GGTCTACCTC
GGCACCACCA CGCACAAGGT GTTCTTCGCC ACCGAGGTGC CCCTGCTCGT CGTCCCCAGC
ACCTAG
 
Protein sequence
MIKTILFASD FSNLTDRAQS YALDLARATG AKVTLIHSVE PIEGAGDDEY VAKLLEGRVQ 
DARSKSQSVV AAFEEAEIAC DVRVEVGKRW KAIVDAASSG DYDLVVLGSH KINDGDKVYL
GTTTHKVFFA TEVPLLVVPS T