Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3344 |
Symbol | |
ID | 8545732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4626626 |
End bp | 4627051 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646388011 |
Product | UspA domain protein |
Protein accession | YP_003267739 |
Protein GI | 262196530 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.225845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA CCATCCTGTT TGCCAGCGAT TTCTCCAATC TCACCGATCG CGCGCAGAGC TACGCGCTCG ACCTGGCCCG CGCCACCGGC GCCAAGGTGA CCCTCATCCA CTCGGTCGAG CCCATCGAGG GCGCGGGCGA TGACGAGTAC GTGGCCAAGC TCCTGGAAGG CCGGGTCCAG GACGCGCGCT CCAAGTCCCA GAGCGTGGTC GCCGCCTTCG AGGAGGCCGA GATCGCGTGC GACGTGCGCG TCGAGGTCGG CAAGCGCTGG AAGGCCATCG TCGATGCCGC CAGCAGCGGC GACTACGACC TGGTCGTGCT CGGCTCGCAC AAAATCAACG ACGGCGACAA GGTCTACCTC GGCACCACCA CGCACAAGGT GTTCTTCGCC ACCGAGGTGC CCCTGCTCGT CGTCCCCAGC ACCTAG
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Protein sequence | MIKTILFASD FSNLTDRAQS YALDLARATG AKVTLIHSVE PIEGAGDDEY VAKLLEGRVQ DARSKSQSVV AAFEEAEIAC DVRVEVGKRW KAIVDAASSG DYDLVVLGSH KINDGDKVYL GTTTHKVFFA TEVPLLVVPS T
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