Gene Hoch_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3325 
Symbol 
ID8545713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4592240 
End bp4592992 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID646387992 
ProductProtein of unknown function DUF2257 
Protein accessionYP_003267720 
Protein GI262196511 
COG category[S] Function unknown 
COG ID[COG4340] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00674067 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGAGTCG GAGCCGCGAT TTCGAATTCG GAACATCCCG CTTCTATCGC CTGGGGCGAG 
GGCGGTGACG TGGTGGGACG GCTGGTGCGG GATGGCTATC TCATGCTGGA CGCCGCGGCG
GTGGCCTACC GCACCGGGGT CGCCGGGCTG GGGGACTTCT GCGCATCGTA CGAGACGCTC
GAGGCCGACC CGGCGCCGGG TAATCGCCTG CGGCGCTACG CGAGCTGCCG CTGGCGCAGC
GACCTGGGCC AGCTCACGCG TCTGGCCGAT ACCGGCTACG CGCAGTCGAG CGCCAACAAC
TATCAGGACG GCGGCCGAGT GCGCGAGTTC GCGCCGATGG CCGATGAGGA CTTTGAAAAC
CCGCTGATCC GCCAGCTTCT GGCCTTCGAC CTGGCCTTCG TGAGCGCCAG CGGACTGCTC
GCGCAGCACG AGTCGCTGAG CGTGGGTCTA CACCAGATTC GCTACCGGGC CGAGGGCCGC
ATGCCGTCGC ACAGCTCGCC GAGCTGGCTG CATCGCGACG ACGAGGATCT GGTGTTCGTG
CATCTCTTCG GCCTGAGCGC CGACGCCATC GGCGGCGATA CGCTCATCGG CGAGAGCCAC
CGCAACCTGC TGGCCATGCT GCGGCTGGAG AAGACGCTGG ACACCCTGAT CGTCACCAAG
AAGCACATGC ACGCGGTCAG CCCGGTGGGC TCGCGCACCG GCGCGCCCGC GTACCGCGAC
ATCCTGCTGG TGACCTTTCA GCCCGCGGAC TGA
 
Protein sequence
MRVGAAISNS EHPASIAWGE GGDVVGRLVR DGYLMLDAAA VAYRTGVAGL GDFCASYETL 
EADPAPGNRL RRYASCRWRS DLGQLTRLAD TGYAQSSANN YQDGGRVREF APMADEDFEN
PLIRQLLAFD LAFVSASGLL AQHESLSVGL HQIRYRAEGR MPSHSSPSWL HRDDEDLVFV
HLFGLSADAI GGDTLIGESH RNLLAMLRLE KTLDTLIVTK KHMHAVSPVG SRTGAPAYRD
ILLVTFQPAD