| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3321 |
|---|
| Symbol | |
|---|
| ID | 8545709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4585529 |
|---|
| End bp | 4587247 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646387988 |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_003267716 |
|---|
| Protein GI | 262196507 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0988206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0174959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCT CTTCCTACGA CGCGGAAGCG CTGCGCCGCG ATCTCGAGAA GATCGTGGGT
CCGCGGCGCG TGTCCCTGCG CGACGACGAC CGGCTCACCT ACAGCCGCGA CATGTGGCCG
CGCCTGCTCC TGGCGGTGCG CGAAGGCGGC GTGCCGTCGC CGTATCGGCC GCACGCCGTG
GTCTGGCCGG AGACCGTGCG CGAGGTCGCC GCGCTGGTGC GCCTGGCCCG CAACACCGGC
CTGCCGATCA TCCCCTACGG CGGCGGCTCG GGCGTGTGCG GCGGCGTGGT GCCGGTGCGC
GGCGGCATCA CCCTCGACCT CAAGCGCATG AACGAGCTGC GCAGCGTGCA GGGCGACGAG
CTGGTGTGCG ACGTCGACGC CGGCATCAAC GGCGAGCGCT TCGAGCGCGC GCTGGCGCGC
CACGGCTACA CCTTCGGCCA CTTCCCCTCG TCGATCTACT GCTCGACCGT GGGCGGCTGG
CTGGCCACGC GCGCGGCCGG GCAGATGTCG ACCAAGTACG GCAAGGTCGA GGATCGCGTC
GCCGGCCTCA CCGTGGTCAC CGGTCGCGGC GAGGTGCTCA CCACCGACGG CCCGGCCCGT
GCCACGCGCG GCCCCGACTG GACGCAGCTC TTGCTCGGCA GCGAGGGCAC CCTGGGCATC
ATCACCTCGG CGCGTCTGCG CCTGGCCCCG GCGCCCGCCA TCCGCGTCCT GCGCGGCTTT
CAATTCGACA ACGTGGGCGC CGGCCTGGAG GCCATCCGCC GGGTCATGCA GCGCGGACTG
CGGCCGGCTG TCGTACGACT GTACGACGAA GTCGACAGCC TGGTGCACGC GCTGGGTCGC
CACACCGGCG ACGACGCCGC GGCGCGCGAT CGCTTTGCCC CCGGACCCGG CGCCGACAAC
GGCGCGCTGC CGATCCTGCC CGGCCCCGAG CAGGCGCAGG AGGCCGAGCG CGCGCCGAGC
TTCTGGCAGC GCCAGCGCAA ACGCCTGAGC GAGGGCCTGC GCCGCGACGC CATGGCCGCG
ATGCTCACCC GGCCGCGGGT GGTCAACGCG CTGCTCGGCA ACGCGGCCGA GCGCGCCATG
CGCCGCGGCT GCCGCATGAT CATCGGCCTC GAGGGCGCGC GCATCCGCAC CGAGATCGAG
GCCGAGCTCA CCTTTGGCGA GCTGGCGCGC GCGGGCGGCC GCGACCTCGG CGAGGGCCCG
GGCAAATCCT GGCTGGCGCG GCGCTACGCG GTCTCCTACC GCATGTCGCC GCTGTTCCGC
GACGGCGCCT TCGTCGACAC CATGGAGGTG GCCGCGAGCT GGGATCGCCT GCTCGACCTG
TACGACGCCG TGCGCGAGGC CATCGGCCGC CACGCCCTGG TCATGGCCCA CTTCTCCCAC
GCGTACCCGG ACGGCTGCTC GATCTACTTC ACCTTCGTCG CCCGCGGCCG CCACCGCCAC
GACGCCGAGC GCATCTACGA CGCCATCTGG CGCGACGGCC TGAGCGCGAG CACGCGCGTC
GGCGGCACCA TCAGCCACCA TCACGGCGTC GGCCTGCTCA AGAGCGCGTA CATGAACGCC
GAGCACCGCG AGGCCATGAG CGTTCTGCGC GCGCTCAAGC GCAGCTTCGA CCCCGATCAT
CTGCTCAACC CCGGCAAGCT CGGCTTCGAG CGCCGGGTCG CCGCGGCCAC GCCGGAGTGG
CTGATGACGC CCGAGGCCGG GCAGGGAGGG CGCCCGTGA
|
|---|
| Protein sequence | MTRSSYDAEA LRRDLEKIVG PRRVSLRDDD RLTYSRDMWP RLLLAVREGG VPSPYRPHAV
VWPETVREVA ALVRLARNTG LPIIPYGGGS GVCGGVVPVR GGITLDLKRM NELRSVQGDE
LVCDVDAGIN GERFERALAR HGYTFGHFPS SIYCSTVGGW LATRAAGQMS TKYGKVEDRV
AGLTVVTGRG EVLTTDGPAR ATRGPDWTQL LLGSEGTLGI ITSARLRLAP APAIRVLRGF
QFDNVGAGLE AIRRVMQRGL RPAVVRLYDE VDSLVHALGR HTGDDAAARD RFAPGPGADN
GALPILPGPE QAQEAERAPS FWQRQRKRLS EGLRRDAMAA MLTRPRVVNA LLGNAAERAM
RRGCRMIIGL EGARIRTEIE AELTFGELAR AGGRDLGEGP GKSWLARRYA VSYRMSPLFR
DGAFVDTMEV AASWDRLLDL YDAVREAIGR HALVMAHFSH AYPDGCSIYF TFVARGRHRH
DAERIYDAIW RDGLSASTRV GGTISHHHGV GLLKSAYMNA EHREAMSVLR ALKRSFDPDH
LLNPGKLGFE RRVAAATPEW LMTPEAGQGG RP
|
|---|
| |