| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3311 |
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| Symbol | |
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| ID | 8545699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4568853 |
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| End bp | 4571081 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 646387978 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_003267706 |
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| Protein GI | 262196497 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.185586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.436741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC AGCGTACCCG CGAGCTCGTC CTCGCCTCGA TCGCGTTCCT GGCTGTGGGC
GTCCTCGGCT ACTGGCTGCT CGAGACCCGT CCCAGCCCCC CCGAGCGTCC GCTGCTGTAC
GTGGCCGACG ACGGCGGCAT CGACACCGCG CGCGGCGCTG CCGGGACCGA GCGCACGCGC
GCGCGGCCGA GCGTGGATGT CGATCCCGAG CGCGCCCGGG TCAGCGGCGA GGTCCGCGAG
TTGCTGTCGG GGGAGGGCGT CGCCGGCGTG AGCGTGGTCT TCGTCCCCGC GGACGAAAAC
CAGGAGCTGA GCACCGAGAG CGACGAGCGC GGCCGCTACG CGATCGAGCT GCCGGCCGGT
CGCTATCGCG TGCGCGCGGT CGGCGAGCAG GTCGTGGCGC TGGACGGCGC GGCCTTTCCC
GGCGCGGGCG AGCCGAGCGC GGTCGCCGAG GGCGCCGGAC AGGGACAGGG ACAGGGCCAG
GGCCAGGGAC TGGAACTCGA GCGCGCCGCG CTCCTGGTCC AGGGCGGCAG CGCGGTCGAC
GACTTCGACA TCGCGGTCCT GCGGCTGGCG CAGGTGAGCG GACGCGTGGT CGACGGCCAG
GGCGAGCCGG TCGCCGGCGC GCTCGTGCGC CACCACACCG AGCTGCTCGA TCGCCGCTTC
ACCAGCGCCA GCACCGCGCC CGAGGGCGAG GCCGGCAGCG ATCGCGCGGG CGCCTTCACC
CTCCGCGTGC CGCCGGGCGC CGTCAGCCTG CACGCCAGCG CCGAGGGCCA CACGCCCTCG
TATACGCGCA TTCGCTGGGT CGCGCCCGGC GCCGAGCTCA GCGGCGTCGA GATCGTGATG
GACGCGGGCG CGAGCGTGAC CGGCCTGGTC GTCGGTCCCG ACGACGCGGC GGTGGCCGGG
GCCGCGATCA CGGCGCAACC CGGATCCGCG CTGGCCGACG CCCTGCGCAC CACCAGCGAC
GCGGACGGCG GCTTTCGCTT CACCGCGGTG CCGCCCGGGC AGGTGCGCAT CGAGGCCAGC
GCGCCCGGGC GCGGCTCGTC CATGCCGGCC ACGGTCACGG TGTCCGATAC CCCCGGGCTG
CGCGGCGAGC GCGTGGTCTT AGTGCTGAGC GCGCCGGTGG TAGCCGCCGG GCGGGTGCTC
GACGCCGAGG GCCGGGGGGT CTCGGGCGCC CGCGTGCGCG CGCTGGCGGC GCAGCGACCC
GAGCCGATCG CCGAGGAGCT GAGCGACAGC AACGGTCGCT TCCGGTTTCG CGCGCTGCCG
CGCGGTCCGC TCAGCTTCGC GGCCGCGGCC ACCGGGTTCG CATCCGGACA GGTGTCCGAG
GTCGCGCTGC CGGCCGAGCA CATCGAGATC CCGCTGGCGC GCAGCGGCGC CGTGCGCGGC
GTGGTCCGCG GCGACGGCGG CCCGCTCGGC CACTTCTACG TGCACGCGCT GCGCCGCGCC
ACCCTGGCCC GCGGCCCCGG CGTGCAGCCC GCGCCCGCGG GCGAGGACGC CTTCTGGGAG
CGCGGCGTGC GCATCGTGTC GCCCGACGGC GGCTATCGCA TCACCGGCCT GCCGCCCGGC
ACCTATACCG TACGCGCGTC CGCGCCCGGC CTGGCGCCGG CCGAGGAGAC CGGCATCATC
GTCGGTCCCG GCAACGAGGC CAGCGTCGAC TTCGCGCTCG CCGGCGGCGG CGCCATCGTC
GGCAGCGTGC GCAACGAGGC CACGGACGCG CCCATCAGCG GCGCCGCGGT CACGGTGTCG
ACCGGCAGCG GCGGCCAGAT GAGCTACACC GACGCGCGCG GCAGCTTCCG CATCCGCGAC
ATCGCGCCCG GGCGGCGCAG CCTCGAGGTC GTGCGTCCGG GCTTCATCGG CCGCGTGCGC
TCGGGCATCA CGGTCGGCGT GGGCGAGCCC GCGCGCGTGG ACCTGGCGCT CACGCCCGCG
GCCCTCGACG GCGGCGACGG CCCCTTCGAG ATCGCCGGCA TCGGCGCGGT GCTGGCCATC
GAGGGCGAGC GCCTCATGGT CCGCGAGCTG ATGCCGCACG CGCCCGCCGA GGTCGCCGGC
GTCGAGCCCG GCGAAGAGGT CTTTCTCATC GACACCCTGC GCACCCGCGG CATCTCGTTC
GAGACCGCGA TCGAGGCCAT CCGCGGCGTC GCCGGCACCT CGGTGCGCCT GGGGCTGCGC
CGCGGCGAGC GCGAGCGCTT CCTCGAGATC GTCCGCGCCG CGGTGCGGGT GAAACCCGCG
CCCGGCTGA
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| Protein sequence | MAKQRTRELV LASIAFLAVG VLGYWLLETR PSPPERPLLY VADDGGIDTA RGAAGTERTR
ARPSVDVDPE RARVSGEVRE LLSGEGVAGV SVVFVPADEN QELSTESDER GRYAIELPAG
RYRVRAVGEQ VVALDGAAFP GAGEPSAVAE GAGQGQGQGQ GQGLELERAA LLVQGGSAVD
DFDIAVLRLA QVSGRVVDGQ GEPVAGALVR HHTELLDRRF TSASTAPEGE AGSDRAGAFT
LRVPPGAVSL HASAEGHTPS YTRIRWVAPG AELSGVEIVM DAGASVTGLV VGPDDAAVAG
AAITAQPGSA LADALRTTSD ADGGFRFTAV PPGQVRIEAS APGRGSSMPA TVTVSDTPGL
RGERVVLVLS APVVAAGRVL DAEGRGVSGA RVRALAAQRP EPIAEELSDS NGRFRFRALP
RGPLSFAAAA TGFASGQVSE VALPAEHIEI PLARSGAVRG VVRGDGGPLG HFYVHALRRA
TLARGPGVQP APAGEDAFWE RGVRIVSPDG GYRITGLPPG TYTVRASAPG LAPAEETGII
VGPGNEASVD FALAGGGAIV GSVRNEATDA PISGAAVTVS TGSGGQMSYT DARGSFRIRD
IAPGRRSLEV VRPGFIGRVR SGITVGVGEP ARVDLALTPA ALDGGDGPFE IAGIGAVLAI
EGERLMVREL MPHAPAEVAG VEPGEEVFLI DTLRTRGISF ETAIEAIRGV AGTSVRLGLR
RGERERFLEI VRAAVRVKPA PG
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