Gene Hoch_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3252 
Symbol 
ID8545640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4483522 
End bp4484565 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content73% 
IMG OID646387919 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_003267647 
Protein GI262196438 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.108967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0428962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGT CGCTGCGAGT CGCCGTATTC AACGATTCGG CCACGATGCG CGCCGCCATT 
CGCGCCGCGC TCGACCCCGA ACCCGATATC GCCATCGTCG CGGAGCGGGG CGACGCCAAT
GACGCCGCCG AGGTCGTCGC GCGCAGCGAC GCCAACGCCG TGATCATGGA CGTGGTCATG
CCCGGCGTGG ACGGCTACGA GGCCACGCGC GACATCATGC GCAACCACCC GACGCCGATC
GTCATGGTGT CGTCGGTGGT CGACGCCAAA GACGCGAGCG TGGTCTTCGC CGCCCTCGAG
GCAGGCGCGC TGCACATCGC CTCGCCCCCG CCGGCGCCCG GCATGCCCGA ATACTCGCTG
CGCTGCGCCG CCTTTGCCGA GCTCTTGCGC GTCGTCGCCG GCGCCCGGCC GCGCACTGTG
GAGCCGACGC CGACGAGCGC CACGCGCACA CCGCCACGCG CCCGCCTGCG CGCCTCCGCC
GGTCCCATCG ACGCCATCGG CATCGCCGCC TCGGCCGGTG GACCGCAGGC GCTCAACGCG
CTGCTGCGCG CCCTGCCCGC CGGGATGCCG CCGCTGCTGC TGGTGCAGCA CCTGGCCGCC
GGGTTCTCGG ACAGCTTCGC GCACTGGCTG AGCGAGTCCA CCGGCCACCC GGTGCACATC
GCCGCCGCGG GCATGCCCCT GCACCGCGGC CACGTGTACA TGGCGCCCGA CGACAATCAC
CTGGGCATCA CCCTCGATCT CCGGGTGTCG CTGAGCAAGG CCCCGGCGAT CGGCGGGTTT
CGGCCCTCCG CTGACGCTCT CTTCACCTCG ATGTCTTCCC TGGGAGCGCG CGCGCTGGGC
GTGATCCTCA GCGGCATGGG TCGCGACGGC GCCGACGGCG CGCTCGCCCT GCGCCGCGCT
GGGGGTCACA TCGCCGCGCA GTCGCTCGAG AGCGCCGCGG TCACCGGCAT GCCCTCGGCG
GCAGCCAAGT CCGGCGCCGC GTCCTCGATC CTCGATCCTC AGGCTATCGC CCGCTGGCTG
GTCAGCAGGA GCCGTCCCTC ATGA
 
Protein sequence
MTTSLRVAVF NDSATMRAAI RAALDPEPDI AIVAERGDAN DAAEVVARSD ANAVIMDVVM 
PGVDGYEATR DIMRNHPTPI VMVSSVVDAK DASVVFAALE AGALHIASPP PAPGMPEYSL
RCAAFAELLR VVAGARPRTV EPTPTSATRT PPRARLRASA GPIDAIGIAA SAGGPQALNA
LLRALPAGMP PLLLVQHLAA GFSDSFAHWL SESTGHPVHI AAAGMPLHRG HVYMAPDDNH
LGITLDLRVS LSKAPAIGGF RPSADALFTS MSSLGARALG VILSGMGRDG ADGALALRRA
GGHIAAQSLE SAAVTGMPSA AAKSGAASSI LDPQAIARWL VSRSRPS