Gene Hoch_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3213 
Symbol 
ID8545601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4428443 
End bp4429939 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content70% 
IMG OID646387880 
Productserine/threonine protein kinase 
Protein accessionYP_003267608 
Protein GI262196399 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0152772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT CGCAGGAATC CATCCGGCCG CGCACCTCGG CGCGTTTGCG CTTCGTAGCC 
CCGCCGGGCA TGAAGGTCGC CGCGACCGGC GACCGCTCGA TCGGCCGCTA CGAGATCGTG
CAGACCCTGG GCAAGGGCGC GATGGGTGTG GTCTATCAGG CCCGCGATCC GGCGCTCGAC
CGCACCGTGG CCATCAAGAC CATCGTGGCC CCGCGCTCGG GCAAGCGCGT GCACACCGCC
TACCTCGAGC GCTTTCAGCG CGAGGCCCAG GCCGCTGCCA AGATGCAGCA CCCGTCGATC
GTCACCATCT TCGATTTCGG CATCGAGGAG GGCGCGCCGT ACATGGTCCT CGAGTATCTG
CCCGGCGAGA GCCTGGCCGA TCGCCTCGAC CAGGTGCGCA TGCGCCTGGG CAAGGCCATC
CAGATCGGAC TCGACCTGGC CAGCGCGCTC GCCTTTGCCC ATCGCCAGCG CATCGTGCAC
CGCGACGTCA AGCCGGCCAA CGTGCTGCAC GCGGGCGAGA ACCGCTGGAA GCTGGCCGAT
TTCGGCATCG CCCGCATGCC GGACTCCGAC CTCACCCAGG TCGGCGTGTT CATGGGCACG
CCCGGCTACT CGCCCCCCGA GGCCATCAAG TTCGGCCACT ACACGCCGCA GGCCGATATC
TTCGCCTGGG GCGCGGTGCT CTACGAGATG CTGTCCGGGC GCATCCCCTA CGAGGGACCG
GATACGCGCA CCACCAACGG CTACGTCATC AAGGCCACGG CGCCGTCGCC GCGCACCTAC
GATCCGACCA TCCCCGAGCC CTTGGCCGAG GTGGTGATGC GCGCGCTCGA CCCCTCGGTA
TCCGACCGCT ACAAAGACGG CGCGGCCGCC GAGAAGGCGC TGCGCGAGGC CTGGGACATG
TGCCTCATCT CGAACATGAT CCCGGGTTCG TGCCTGGCTG GCGAAGATCT CCCTCACGAT
CGCGTCCAGG GCGAGATGCA CACGGGCACC GTGGTCAAAG CGCCGGGAGC GGAGGCGGCG
ACCCCGAGCG CGGCGCCCCA GAACGAGGCG GATTCGCGTC CGGTCCTGGT CATCGAGTCG
AGTCAGGGGC GGATTTCGGA CGATGCGCCC ACGCGCGTGC TCGTGCGCGA CGGCGACGAC
GTACGCATCA TGGCCAACCC CGCGGGCGCA GGCGCGGAAC CCGTGCCCGC CCCGTCCGCC
CAGATGCCGG CAGCACAGCC GGCGGCGCAG CCCTCGCGCG GCAGCGCGCC GGTGGCCGCG
GCCAACCCCA GCCAGATGCA CCCCGCGGCC GCGCCGCCGC ACGCAGGCGC CGATGCTCGT
TCCGAGCCGA TGAACGCGCT CTCGCGCGAG TCCATGGCCA TGCCGGCGGC CGAGGGCGAC
TTCGCCCGCA ACGCGCAGGG CGCGCGAACG ACCAACATGC GCGTGTTTTT GTGGGCCGGC
ATCGCGGTGA TGATCATCGT GATGGTCGGC GTGCTGGTCA CGCTCATCAA TCGCTGA
 
Protein sequence
MSDSQESIRP RTSARLRFVA PPGMKVAATG DRSIGRYEIV QTLGKGAMGV VYQARDPALD 
RTVAIKTIVA PRSGKRVHTA YLERFQREAQ AAAKMQHPSI VTIFDFGIEE GAPYMVLEYL
PGESLADRLD QVRMRLGKAI QIGLDLASAL AFAHRQRIVH RDVKPANVLH AGENRWKLAD
FGIARMPDSD LTQVGVFMGT PGYSPPEAIK FGHYTPQADI FAWGAVLYEM LSGRIPYEGP
DTRTTNGYVI KATAPSPRTY DPTIPEPLAE VVMRALDPSV SDRYKDGAAA EKALREAWDM
CLISNMIPGS CLAGEDLPHD RVQGEMHTGT VVKAPGAEAA TPSAAPQNEA DSRPVLVIES
SQGRISDDAP TRVLVRDGDD VRIMANPAGA GAEPVPAPSA QMPAAQPAAQ PSRGSAPVAA
ANPSQMHPAA APPHAGADAR SEPMNALSRE SMAMPAAEGD FARNAQGART TNMRVFLWAG
IAVMIIVMVG VLVTLINR