| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3211 |
|---|
| Symbol | |
|---|
| ID | 8545599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4426309 |
|---|
| End bp | 4427295 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646387878 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003267606 |
|---|
| Protein GI | 262196397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00540258 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATTC GGCTTGTGGG GTGGGTGTTC GCGGCGTACA TTCGCTCCGT GTCTTCGCTC
CCCGCGCTGA CCTTCGCGTC TCCGCGCGCG TTGCCCAAAC CATCGTCGTT GACCGGCCGC
GTGGTGGTGC TCGACATCGC CTTCGCCGCC ACCTCGGGCG CCGGGGTGTC GTTCGTCGAG
ATCACCAAGC CCTTCCTCGA CGGGCTCGGC GATCGCCTGG CCGCCTGGGT CGATCATCAC
GACCACGAGC GCCACCCCGA GTACGCGGGC GACGCCCGCT TCACCCTGGC GACCAAAGCC
GAGCACGGCG CGTGTCCGGA GATGATCACG CCGGAGCTGG TGCGCGACGC CGGGCCCATC
GACTGCATCG TCACGCACAT GGACCTCGAC GGCCTGTACG CGGCCGCGAA GTGGATCCTG
GGCGGCCGCG AGCCCTATCC CGGCGCCGAC CGCGACGCCC ACTGCATCGA CACGCGCACC
GGCGAGCCCG GTCCCGAGGC CGTGCGCATC GACAAGGCAC TGCGCGCGCG CTTCCGCGAC
GACTGGCTCA AGCGCGCGGT GATCCACTAC CTGGTCGAGG GTCTGCCCGC GGGCGCCCAT
CGCGAGGCCA TCACCGAGGC CGCGCGTGAA TTCGAGGCCC GCCAGCGCGG CACCGCGGCG
CTGTGCGAGC GCTTCGAGCT GCGCGGCCGC ATCGCCTATG TCGACGCGCG CATTCGCAAG
GGGTCCTACG ACAAGACCGA TCTGTTGCTG AGCGGGCAGG ACCGCGCCGA CGTGGCCCTG
GTCCACGACG CCGGCATGCT CACCATCGCC GCCCGCTACG ATTCGGGCTG GAACTTCGTC
GATCTCTTCG GGTTGGGCGG CGGGATGCCC ACGCGCGTGA GCATCCCCGA GCGCCGTCTG
GACGAGGTGT TGCGCACTAT CAACGAAGCT CCCGCGCCGC GTTCGCGGAC GGGCGCGCAG
GAAGGCGAGG CTCCGCTGCG CGCGTGA
|
|---|
| Protein sequence | MVIRLVGWVF AAYIRSVSSL PALTFASPRA LPKPSSLTGR VVVLDIAFAA TSGAGVSFVE
ITKPFLDGLG DRLAAWVDHH DHERHPEYAG DARFTLATKA EHGACPEMIT PELVRDAGPI
DCIVTHMDLD GLYAAAKWIL GGREPYPGAD RDAHCIDTRT GEPGPEAVRI DKALRARFRD
DWLKRAVIHY LVEGLPAGAH REAITEAARE FEARQRGTAA LCERFELRGR IAYVDARIRK
GSYDKTDLLL SGQDRADVAL VHDAGMLTIA ARYDSGWNFV DLFGLGGGMP TRVSIPERRL
DEVLRTINEA PAPRSRTGAQ EGEAPLRA
|
|---|
| |