| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3208 |
|---|
| Symbol | |
|---|
| ID | 8545596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4423968 |
|---|
| End bp | 4424405 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646387875 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003267603 |
|---|
| Protein GI | 262196394 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.609634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00540258 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGC TGCTCACCGA CGCGCGCCGC GCCTATCGCA CGACCAGCAA TCCCCTGATC
CGCTGGCTCA GACGCGGGCA GATCGCGCGC CAGCGAAACC GCGATCAGAG CCGGGCCGAG
GTGTACCGCG CCCGCTCGCG GCCGGCCGCC GATACCTGGC GTTGGCGGCC GCCGAAGTTC
CAGACCCTGC TGCGCTTCGA GGATCACGGC CAGCTCAGCA TCGTCCGCTT TCGGCGCTCG
TCGTTCAGTA CCATCGAGCC CGATCGCCGC TGCCGGCTGC GCGTCGCGCG CACGGCCAGA
AGATCCTGGC GACGCTACCT GCTGCTCTGT GAGCTCCGCG ACGCGCACTG GATCGCGGGC
GGTCTCAACC ACTGGAGCGA GCACGCGGTA CGGCCCAAGC TGCCCGCGGC CCGCGTGCTC
GTCAAGAAGC AGAAGTAG
|
|---|
| Protein sequence | MGKLLTDARR AYRTTSNPLI RWLRRGQIAR QRNRDQSRAE VYRARSRPAA DTWRWRPPKF
QTLLRFEDHG QLSIVRFRRS SFSTIEPDRR CRLRVARTAR RSWRRYLLLC ELRDAHWIAG
GLNHWSEHAV RPKLPAARVL VKKQK
|
|---|
| |