| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3200 |
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| Symbol | |
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| ID | 8545588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4410257 |
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| End bp | 4411084 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646387867 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003267595 |
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| Protein GI | 262196386 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.126037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.165541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATTCG AGATCGACAC AGTCCTGCAA CCGCTCGTCG CCTTCATCAC CGTCTATGGC
ATTCAGTTCA TCGGCGCGAT CCTGATCCTG ATCCTGGGTC GCTTCGCCGC CAACATCGCC
AAGCGCTCGG TGGCCCGCTT CATGAATTTC CGCCACGTGG ACAGCACCGT GGTGTCCTTC
GTGAGCAGCC TGGCCTACTT CACCATCCTC ACCGTGGCCG TGCTGGCGGC GCTGTCGAAG
TTCGGCGTCC AGACCACCTC GTTCATCGCC GTGCTGGGCG CCGCGGGCTT TGCCGTCGGC
CTGGCGCTAC AGGGCTCGCT GTCGAACTTC TCGGCCGGCG TGCTGATCCT CTTGTTCCGG
CCCTTCAAAG TCGGCGACTA CATCAAGGCC GGCGGCACCG AGGGCGAGGT CAAGGGCATC
CACCTGTTCG TCACCGAGCT GGCCACCCTC GACAACGTCC AGGTCATCGT GCCCAACAGC
GCCATCATGG GCGGCAACAT CTCCAACCTC TCGGGCTACG ACAAGCGCCG CGTCGACCTC
GCGCTCGGCA TCAGCTACGG CGCGTCCATC GCCCAGGCCA CCGAGATCGC CAAGCGCGTC
ATGTCCGAGG ACCCGCGCGT GCTCGCCGAG CCGGCGCCCA ACGTCGTGGT CCGCGGCTGG
GGCGACTCCA GCATCGACAT CTTCGCCCTG CCCTGGGTCG ATCCCAAAGA TTACTGGGGC
GTGTACTTCG ACATGCACCG CAAGCTCAAA GAGGCCTTTG ACGAGGCCGG CATTGAGATT
CCCTTCCCGC AGCGCGTGGT CCACATGGCC AATGACGAGG CCGCATAG
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| Protein sequence | MEFEIDTVLQ PLVAFITVYG IQFIGAILIL ILGRFAANIA KRSVARFMNF RHVDSTVVSF
VSSLAYFTIL TVAVLAALSK FGVQTTSFIA VLGAAGFAVG LALQGSLSNF SAGVLILLFR
PFKVGDYIKA GGTEGEVKGI HLFVTELATL DNVQVIVPNS AIMGGNISNL SGYDKRRVDL
ALGISYGASI AQATEIAKRV MSEDPRVLAE PAPNVVVRGW GDSSIDIFAL PWVDPKDYWG
VYFDMHRKLK EAFDEAGIEI PFPQRVVHMA NDEAA
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