Gene Hoch_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3188 
Symbol 
ID8545576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4392591 
End bp4393448 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID646387855 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_003267583 
Protein GI262196374 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0485468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CATCATCGCA GCTACCGCCG CCGCCCGCCG AGGACGAGCA CGCGAGCGGC 
GCTTCGGCGT CCGCGGCCGA CGACACCGGC CGAGGCGACC TCAGCGCCTG GTTCGACGCC
GAGCGCCTGG CGGCCAAGAG CGCCGAGCTC GAGCGCGCCA CGCCGCAGGA GATCCTGGCC
TTCGCGCTCG CGAGCTTTGC CCCGCGGGTG GCGATCTCGA CCGCCTTTGG CGTCGAGGGC
TGCGCGCTCC TGCACATGGC CGTGCAGATC GACCCCTCGG TGCGCGTCTT CACCATCGAC
ACCGGCTACC TCTTCGACGA GACCCAGCAG CTCATCGAGC GCATGCGCGA GCGCCTGGGC
ATCGAGATCG AGACCTTCCA CCCCGAGCTG AGCGTGGCCG AGCAGGATGA GCGCTACGGC
GAAGCCCTGT ACACGCGCGA CTCCGACGCC TGCTGCGCCA TGCGCAAAGT CGAGCCCACC
CAGCGGGCCC TGCGCGGCCT CGACGCGTGG ATCGCGGGAC TGCGCCGCGA CCAGGGCGGG
GCCACCCGCG CCCAGCTCGC CATCCTCGAG CGCTACCAGC GCGGCGACGC CGAGCCGCTG
ATCAAAGTGC ATCCCCTGGC CAACTGGAAC CGCAGCGACA CCTGGCGCTA CGTGCTCGAC
AACGAGGTGC CCTACAACCC GCTGCTCGAC CAGGGCTACA AGTCCATCGG CTGCTGGCCG
TGCACGCGCG CCGTGGGCGC CGACGCTGAC GAGCGCGCCG GCCGCTGGGG CGGCAAGAAA
GCCGAGTGCG GCATTCACAC CTTCCTGCCG CGCGCGCCCG AGTCAGGCTC CGCCGACGGC
GACGACAGCG CCGACTGA
 
Protein sequence
MSTASSQLPP PPAEDEHASG ASASAADDTG RGDLSAWFDA ERLAAKSAEL ERATPQEILA 
FALASFAPRV AISTAFGVEG CALLHMAVQI DPSVRVFTID TGYLFDETQQ LIERMRERLG
IEIETFHPEL SVAEQDERYG EALYTRDSDA CCAMRKVEPT QRALRGLDAW IAGLRRDQGG
ATRAQLAILE RYQRGDAEPL IKVHPLANWN RSDTWRYVLD NEVPYNPLLD QGYKSIGCWP
CTRAVGADAD ERAGRWGGKK AECGIHTFLP RAPESGSADG DDSAD