| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3187 |
|---|
| Symbol | |
|---|
| ID | 8545575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4391907 |
|---|
| End bp | 4392515 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646387854 |
|---|
| Product | adenylylsulfate kinase |
|---|
| Protein accession | YP_003267582 |
|---|
| Protein GI | 262196373 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0529] Adenylylsulfate kinase and related kinases |
|---|
| TIGRFAM ID | [TIGR00455] adenylylsulfate kinase (apsK) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0460618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGG TCAAGAAAGG CTTCGTCCTG TGGTTCACCG GCCTCTCCGG GGCTGGCAAA
TCCACGCTTT CCGCCCGTGT TGCCGCGCAC TTACAAGCCG CCGGGTGCCC GGTCGAGCTG
CTCGACGGCG ACGAGGTGCG CACCCACCTG TCGAAAGGAC TGGGCTTCAG CAAAGAAGAC
CGCGACACCA ACGTTCGCCG CATCGGCTTC GTGGCCCGGC TGCTGGCGCG GCATGGCGTG
GTCGCCATCA CCGCCGCGAT CTCGCCCTAC AAAGACATCC GTGACCAGCA GCGCGCCGAG
GCCGAGGCCG CGGGCGTGGG GTTTTGCGAG GTGTATATGG AGTGTCCGCT CGAGGTGCTG
GCCGAGCGCG ACGTCAAGGG GCTGTACAAG AAGGCCCTCG CTGGCGAGAT CGAACATTTC
ACCGGCGTGT CTGACCCCTA CGAGCCGCCG AGCGCGCCCG ACGTGACCAT CCGCTCGGAC
CGCGACAGCA TCGACGACGG CCAGCAGCGC CTGTTGGCCG CCCTGGTCGA GCGCGGTCTG
CTGGCGCCGG CGCTGCTGTC GCGCGATCCC CAGGCCGTGC GCGAGGGCGA TGCCCCGAGC
GAGGCCTGA
|
|---|
| Protein sequence | MDLVKKGFVL WFTGLSGAGK STLSARVAAH LQAAGCPVEL LDGDEVRTHL SKGLGFSKED
RDTNVRRIGF VARLLARHGV VAITAAISPY KDIRDQQRAE AEAAGVGFCE VYMECPLEVL
AERDVKGLYK KALAGEIEHF TGVSDPYEPP SAPDVTIRSD RDSIDDGQQR LLAALVERGL
LAPALLSRDP QAVREGDAPS EA
|
|---|
| |