| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3186 |
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| Symbol | |
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| ID | 8545574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4389909 |
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| End bp | 4391765 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387853 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_003267581 |
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| Protein GI | 262196372 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.183634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0997448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATT TCCTCTCGCA AAACCAGAAG ACTCACGGCT GCGGCGCCCT GCGCGCCGAC
GACAACGGCA AAACCGTCGT GCTCACGGGC TGGGTGGACG TGCGCCGCGA TCACGGCGGC
TGCGTGTTCG CCGACCTGCG CGACCGCACC GGGCTCACCC AGATCGTCTT CGATCCCACG
GTCGATGCCG AGGCCCACAA GCTGGCCGGC GACCTGCGCA CCGAGTACTG CATCGGCGTG
GTCGGCGAGG TGCGCTCGCG CGGCGACAAC GTCAACCCGC GCATGCCCAC CGGCGCCATC
GAGGTCGCCT GCAAGCAGAT CGAGATCTTC TCGCGCGCGG CCACGCCGCC GTTCCCCATC
GAGGACGATC TCGACACCAA CGAGGCGCTG CGCCTCTCCT ATCGCTATCT CGATCTGCGC
CGCCCGGTGC TGCAGCGCAA TCTGCAGATG CGCGCGCAGG CGGTGCACAG CATGCGCACC
TACCTGGCGG CCAACGGTTT TTCGGACATC GAGACGCCGT TCCTGGTCAA GTACACGCCC
GGCGGCGCGC GCAACTTCGT GGTGCCCTCG CGCCTGCAGG CGGGCTCGTT CTACGCGCTG
GCCGAGTCGC CGCAGATCTA CAAGCAGCTC CTCATGGTCG CCGGCTTCGA GCGCTACTAC
CAGGTGGTGC GCTGCTTCCG CGATGAGGAC CTGCGCCTCG ACCGCCAGCC CGAGTTCACC
CAGATCGATA TCGAGCTGTC GTTCATCGAT GAGAAGGGGC TGCAGACCAT CATCGAGGGC
ATGATCGCCA AGCTGTGGCA GGACGTGCTC GGCGTCGAGT TGCAGACGCC CTTCCTGCGC
ATGAGCTGGG ACGAGGCCAT GCGCAAGTAC GGCGTGGACA AGCCCGACCT GCGGCTCGAT
CTCGAGCTGT GCGAGATCAC CGAGGCGTGC GCCAGCTCGG GCTTCCAGGT GTTCGAAAAC
GTCATCGCCA AGGGCGGCAT CGTCAAGTGT CTGCGCGTGC CCGAGGGCGA CCGCCTGAGC
CGCACCCAGC TCGACGGCCT CACCGGCTTT GCCAAGCCCT ACGGGGTCAA GGGCATCGCG
TATGTGCGCG TCAAGGATGG CGGCGCCTGG CAGGGCGCGC CCGGCAAGGC CTTCAGCGAC
GAGGCCCGGC TGGCGGTCAA CGCCGCGGCC GGCGCCAGCG ACGGCGACGT GCTGCTGTTC
TGCGCCGACA AGCCGCGGGT GGCCAACACC TGCATGGGCG CCGTGCGGCT GCACATCGGC
GACAAGCTGG GCATGATCCG CGAGGGCGAG TGGCGCTTCA TGTGGCTCAC CGACCCGCCG
CTGTTCGAGC AGCCCGAGGA CGGCGGCGCG CTGGTGTCCT CGCACCACCC CTTCACCTCG
CCGCGGCCCG AGGACGAGGA GCACCTCGAG AGCGCGCCCG AGCGGGTGCT GGCGCGCGCC
TACGACCTGG TGCTCAACGG CGTCGAGGTC GGCGGCGGCT CCATCCGTAT CCACCGCAGC
GACCTGCAGG CGCGCATCTT CAAGGCGCTG GGTATCTCGG ACGAGGAGGC ACAGGAGAAG
TTCGGCTTCC TGCTCGAGGC CTTCAAGTAC GGCCCGCCGC CGCACGGCGG TATCGCGCTC
GGCCTCGACC GCCTGAGCAT GCTGCTCACG GGCGCCGAGT CGCTGCGCGA CGTGCTCGCC
TTCCCCAAGA CGCAGAAGGG CTCGGACCTG ATGAGCGATG CGCCCACGCC GGTGGGCAGC
GCGCACCTCG ACGAGCTGTA CATCCAGCTC AAGCCCGAGC TGGCCGACAA GCTCGCGGCC
GAGCGCGCGG CCGCCGCCGC TGGCGACGAC GGCGCTGGCG ACGACACCGA GTCCTGA
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| Protein sequence | MSDFLSQNQK THGCGALRAD DNGKTVVLTG WVDVRRDHGG CVFADLRDRT GLTQIVFDPT
VDAEAHKLAG DLRTEYCIGV VGEVRSRGDN VNPRMPTGAI EVACKQIEIF SRAATPPFPI
EDDLDTNEAL RLSYRYLDLR RPVLQRNLQM RAQAVHSMRT YLAANGFSDI ETPFLVKYTP
GGARNFVVPS RLQAGSFYAL AESPQIYKQL LMVAGFERYY QVVRCFRDED LRLDRQPEFT
QIDIELSFID EKGLQTIIEG MIAKLWQDVL GVELQTPFLR MSWDEAMRKY GVDKPDLRLD
LELCEITEAC ASSGFQVFEN VIAKGGIVKC LRVPEGDRLS RTQLDGLTGF AKPYGVKGIA
YVRVKDGGAW QGAPGKAFSD EARLAVNAAA GASDGDVLLF CADKPRVANT CMGAVRLHIG
DKLGMIREGE WRFMWLTDPP LFEQPEDGGA LVSSHHPFTS PRPEDEEHLE SAPERVLARA
YDLVLNGVEV GGGSIRIHRS DLQARIFKAL GISDEEAQEK FGFLLEAFKY GPPPHGGIAL
GLDRLSMLLT GAESLRDVLA FPKTQKGSDL MSDAPTPVGS AHLDELYIQL KPELADKLAA
ERAAAAAGDD GAGDDTES
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