Gene Hoch_3184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3184 
Symbol 
ID8545572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4387675 
End bp4388595 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content67% 
IMG OID646387851 
ProductFHA domain containing protein 
Protein accessionYP_003267579 
Protein GI262196370 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.148023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.306056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCT TGAAGCGGCG AGGCACCAAC GAGACCTTCC GGCTCGCGGC CCGATATCGT 
GTCGGCCGTA GCCCGTCAAG CCATCTCTGC CTAACCAACC GCCTGGCGTC CAACACCCAC
GCCGAGATTC ATTGGAACGG TTCGACCTGG GAGATTCGAG ACCTGGGTAG CAGCAACCAC
ACCTTCGTGG GCGGTCATCG CCTCAAGGGT GGCGAACAGG TGACCCTGCT ACGCGGCGTG
CGCCTGGCGT TCGGCGACCC CAGCGAGATT TACGAATTCA TCGACGACAG CCCGCCGGGC
GCCGCCGCGG TGAGCGACAG CGGCGATCGC CAGGAGGAGG AGGACGGCAT CCTGGTGCTG
CCCAGCGCCG AAGCTCCGGT GCTCACCATC TTCGACCCGG GCGGCGGTAC CTGGGTGGCG
GAGGGCGATG ACGGCTCCCG GCGGCGCATC AGCAACGGCG AGACGCTGAG CGTCATCGGC
GAGCGCTGGC AGGTCGAGCT GCCCGAGGTA CTCGAGGCCA CGTGGCAACC GGGCTCCGCG
CGTATGGTGC TGCACAGCTT GACCCTGCGC TTTGCCGTGA GCCGCGATGA GGAACACGTC
GAGGTGAGCG CCCTCCAGGG TGGCCACGTG GTCGAATTGC CGGCGCGCGC GCACAACTAC
ATGCTGCTCA CGCTGGCGCG CGAACGACAG CGCGACCGCC AGGATGGAGC CTCCGAGGCC
AATGCCGGCT GGATCCACGT CGAGGATCTG CTCGATATGC TGCAGATCAG CGAGGGCGCG
CTCAACGTCG CTATCTGCCG CGCGCGCCGC GATATGGCTC GCGCCGAGGT ATTCGGCGCG
ACCGGGCTCA TCGAGCGCCA AGCCGGCGGT ACGCGGCGTC TTCGTCTCGG TGTCCAAAAT
ATCGATATCC TGAGCACCTG A
 
Protein sequence
MALLKRRGTN ETFRLAARYR VGRSPSSHLC LTNRLASNTH AEIHWNGSTW EIRDLGSSNH 
TFVGGHRLKG GEQVTLLRGV RLAFGDPSEI YEFIDDSPPG AAAVSDSGDR QEEEDGILVL
PSAEAPVLTI FDPGGGTWVA EGDDGSRRRI SNGETLSVIG ERWQVELPEV LEATWQPGSA
RMVLHSLTLR FAVSRDEEHV EVSALQGGHV VELPARAHNY MLLTLARERQ RDRQDGASEA
NAGWIHVEDL LDMLQISEGA LNVAICRARR DMARAEVFGA TGLIERQAGG TRRLRLGVQN
IDILST