| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3157 |
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| Symbol | |
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| ID | 8545545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4342263 |
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| End bp | 4344842 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646387824 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_003267552 |
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| Protein GI | 262196343 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.388874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGGC ACCGCCTGAA GGCGTGGTTG ATCGAGCCGT CGGCGAGGCT CGAGGAACCC
GACGCGCGAC AGCGCGCGCG CCTGTTTGCG ATCGGCGCGT TGTTGCTGAT CGTGGGCGAG
CTCAGCGGCC TGCTGCTGGC GCCGTTCATG TGGCCGGCGC TGGTGCCCAT GGGCGCGCTG
CTCGTCTTCG CCTACGCGCT CGGGCGCTCG CGCCACTACC GCGTCGGCGC GTTTCTGGCG
ATGCTGGTGT GCGTGCTGCA TCCGGTGCCC AACATGCTGG TGCGCGGCAT TCCGCTGCAC
GGCGAGATCG CGTTCCTCGA GCACGCGCCC TGGCTGGTGC TGGCGCCCAT GCTGACCAGC
GTGTGGTTCT CGGTGGGCGC CATCATCTTG GTCACGTTGC TCGAGGTCGT GGTCCTGGTG
CTGCTGACCG TCTACCTCTT GGGCTCGCCC GAGCCGGTGG CGCAGTCTTC ACTTCTGTTC
CTACTTATCA CCGGCTTCCT CACCGTGCTC GCGGCGCGGG TGCGCGAGCA GGACCGCCAG
CGCGTGGCCG CGCAGGCGCA GCAACTGCTC GAGAGCGACG CTCGCTATCG CGAGCTGTTC
GACGCCTCGG TCGAGGCCAT GGCGGTGTGC GACGAGGGCC GCATCGTCGA GGTCAACCCG
GCCTTCGAGC GCCTCTTTCG CTGCCGCGCG ACCGAGGCCA AGGACCAGCC CTTGGCCGTG
TTCGTCGACC AGGCGCTGGC GCCCAGCGAT GGCGCGGCCG CGTCCATCGA GGGCAGCGGC
ATCCGCATCA CGGGCCGCGA GCTGGCGGTC GAATCCATCG GTCGCCGCCC CGACGGCGCC
AGCTTCCCGG TCGAGCTGCG GCGCGCCACC GGCCGCCAGC TCGGCGAGCG CATCGTCGAC
GTGGTCGGCC TGCGCGACAT CAGCGCGCAC AAGCGCATCG AGGCCACCCT GGTCGAGGCC
AAAGAGCTGG CCGAGGCCGC GGCCCGCGCC AAGACCACCT TCCTCACCAG CATGAGCCAC
GAGCTGCGCA CGCCCATGAA CGCCATCATC GGCATGACCG GCCTGCTGCT CGACGGGCCG
CTGGCGAGCG CGCAGCGCGA CTATGTCGAG ACCATCCGCG AGGGCGGCGA CGCGCTGCTC
ACCATCATCA ACGACATCCT CGATTACGCA CAGATGGAGT CGGGCACCCT GCGGCTCGAC
TGCGAGCGCT TCGACCTGTA CCGCTGCGTC GAGTCCGCGG CCGAGCTGGT CGCCGCCCAG
GCCGCGGCCA AGCAGCTCGA GCTGGACGTC TTTCTCGACC CGGCGCTGCC GAGCTTCGTC
TACGGCGACG AGGCCCGGCT GCGGCAGATC CTGGTCGAGA TCCTCAGCAA CGCGCTCAAG
TTTACCGAGC GCGGCCTGGT CCGCCTGGTG GCGGCGCCGG GCGAGGCCCC GGCTAGCGGC
GGCGGCGATA GGGCAGGGGC GCCGGGCGCC GACGACACCG CGGTGTTGTC CTTCCACGTC
AGCGACACCG GCATCGGCAT CTCGAATGCG CAGCAAGCCG ATCTCTTTCA ATCCTTTCGC
CAGCTCGACG GCTCGCGCAG CCGCAGCTAC GGCGGCACCG GCCTGGGCCT GGCCATCTGC
CGCTACCTGG CCGAGCACAT GGGCGGCGCC ATCGCGGTCG ACAGCGAGCT GGGCGCGGGC
GCGACCTTTC ACGTGGTCGT GCGCCTGCCC GCGGACCGCA GCGCCACGGC GCCGTACCTG
GTCGCCTCGC CGCGCCTGGC CGGCCGTCGC CTGCTGCTCG GCGAGGGCAA CGCCGCGGTG
CGCGCGAGCC TGCGCCGCAT GGCCGAGCAC TGGGGCATGG AGGTGCGCGA GGCCGAGCAC
CTGCGCCAGC TCGAGGACAG CGCCAGCGGC CCCGCGGCCG TGGCGCTCGT GGCCGAGACC
TTGCCCGGCC TCGACGCCGC CGGCGAGGAC ATCGGCGGCC AGCGCGACGC GCTCATCGCC
GCGGTCCGCG CGGTGAGCGG CGACGCCTCC TTGGCCGTGG TGCCCATGGG CTTCGACGGC
GAGGCGCGCG GCGAGGGCGG CGGCGAGCCC GGCGCGGACC AGGCGCAGCC CTTGCGGCTG
TCCAAGCCGG TCGGCTGGGC CGCGCTGCGG CGCGCGCTGG ATCAGGCCGT GGGCGTCCGC
TCTGAGGTCG GCGTGGCCGC GGCCCTGCAA CCGGTGGCGC GGGCGCGCAG CGCGAGCGAG
GGCCTGCGCA TCCTGGTGGC CGAGGACAAC CTGGTCAACC AGCGGCTCAT GCGCCTGCTC
CTGGGCCGGC TCGGCTATCG CGCCGATGTC GTGGCCAACG GCCGCGAGGT GCTCGACGCG
GTCCGGCGCC AGCGCTACGA CGTCATCCTC ATGGACCTGC ACATGCCCGA GATGGACGGC
ATGGAGGCCA CCAGCCTGAT CCGCAGCACC CTGGGCGCCG ACAGCCAGCC GCGCATCATC
GCGGTCACGG CCGACGCGCT CGACGAGACC CAGGAGCGCT GCCGCGCCGT CGGCATGGAC
GCCTGCCTCA CCAAGCCGGT CATGGTCGAT CAGCTCACCG CCGCGCTGAG CCAGGCCTGA
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| Protein sequence | MIGHRLKAWL IEPSARLEEP DARQRARLFA IGALLLIVGE LSGLLLAPFM WPALVPMGAL
LVFAYALGRS RHYRVGAFLA MLVCVLHPVP NMLVRGIPLH GEIAFLEHAP WLVLAPMLTS
VWFSVGAIIL VTLLEVVVLV LLTVYLLGSP EPVAQSSLLF LLITGFLTVL AARVREQDRQ
RVAAQAQQLL ESDARYRELF DASVEAMAVC DEGRIVEVNP AFERLFRCRA TEAKDQPLAV
FVDQALAPSD GAAASIEGSG IRITGRELAV ESIGRRPDGA SFPVELRRAT GRQLGERIVD
VVGLRDISAH KRIEATLVEA KELAEAAARA KTTFLTSMSH ELRTPMNAII GMTGLLLDGP
LASAQRDYVE TIREGGDALL TIINDILDYA QMESGTLRLD CERFDLYRCV ESAAELVAAQ
AAAKQLELDV FLDPALPSFV YGDEARLRQI LVEILSNALK FTERGLVRLV AAPGEAPASG
GGDRAGAPGA DDTAVLSFHV SDTGIGISNA QQADLFQSFR QLDGSRSRSY GGTGLGLAIC
RYLAEHMGGA IAVDSELGAG ATFHVVVRLP ADRSATAPYL VASPRLAGRR LLLGEGNAAV
RASLRRMAEH WGMEVREAEH LRQLEDSASG PAAVALVAET LPGLDAAGED IGGQRDALIA
AVRAVSGDAS LAVVPMGFDG EARGEGGGEP GADQAQPLRL SKPVGWAALR RALDQAVGVR
SEVGVAAALQ PVARARSASE GLRILVAEDN LVNQRLMRLL LGRLGYRADV VANGREVLDA
VRRQRYDVIL MDLHMPEMDG MEATSLIRST LGADSQPRII AVTADALDET QERCRAVGMD
ACLTKPVMVD QLTAALSQA
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