| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3155 |
|---|
| Symbol | |
|---|
| ID | 8545543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4338370 |
|---|
| End bp | 4341120 |
|---|
| Gene Length | 2751 bp |
|---|
| Protein Length | 916 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646387822 |
|---|
| Product | UTP-GlnB uridylyltransferase, GlnD |
|---|
| Protein accession | YP_003267550 |
|---|
| Protein GI | 262196341 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.620128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.567988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAACCAT CGCAGGCAAC TCCGCATAGC GACGCGCTCG CCGCTCGCTT CACCGAGGCG
CGCGCCCACG CTCTGCGCGC GCTCGACGAG GGCGTGGGCG GACGCGCGGG CTGCGGACTG
CTGGCCGGGG CGTGCGACGA TATCGTCGCC GAGCTGTGGT CCGCGGCCGA GGCCGCCGAG
CCCTCGGAGG CGCCGCTGGC TCTGGTGGCC ACCGGCGGCT GGGGACGCCG GGCCGTGTGT
CCGTTTTCCG ATCTCGACTT CATCCTGCTG TCGAAGCCGC GCGCGCGAGA CGCGGCGCGC
CGTCGCGCCG ACGCGCTGAT CTATCCCATG TGGGATGCGC GCATGCGCGT GGGACACGCG
GTGCGCACGC CGCGCGAGGC CGCGCAGCTC GCGGGCGGCG ATCTGGCCAC GGCGACCGCG
TTGCTCGACC TGCGCCACGT CGCCGGCGAC CCCGCGCTCA CCGAGGAGCT GACGCGCAGC
GCCCGGCAGA TCCTGGCGCC CGGCGGCAAC GCCAACGAGT TCGTCACCCG CCTGGCCGAG
GAGCGCACCC GGCGCCACGA CAAGTTCGGC GACTCGCTGT ATCTGCTCGA GCCCAACCTC
AAGCACGGCA TCGGCGCGCT GCGCGACCTC GACACCGCGC TGTGGGCGGC CAAGGCGCGC
TGGTCCACGG GCGTGCCCGC GGAGCTGGTG ACCTTTGGCG AGCTCACCCA CCGCCAGGGC
CGGCTGCTCG AGGACGCGCT GGATTTTCTG CTCATGCTGC GCTTTCGCCT GCAGGCCCAG
GCCAAGCGCG CCACTGACCA GCTCAGCTTC GAGAGCCAGG AGGCCATCGC CGCGCACCTG
CACCCCGACG CCACCTTGCC CGAGGGCGGC ATCCGGCCCG CGGTCGCGCC CGCGGTCGAG
CTGCTGATGC GCCAGTACTA TCTTCACGCG CGCGATGTCG TGCGGCTCAC CGACCGCGTG
CTCGAGATGG CCCGGGTGCC GGCGCGGCGC AAGCCGCGGG TGCGCCGCGT GGACTCGGTG
TTCTTGCTGT TCAACGGCAA GCTCGCGGTC AAAGACCCGG ACATGCTGCG CCACCGCCCA
GCCGAGATGC TGCGCCTGTT CCGCGTCGCG CTCGACCTCG AGGTGCCGGT CTACAGCCAC
ACCAAGGAGC TGGTGGCCGA GCACCTGGCC GCGCACGAGG GTCTGCTCTC GCGCACCCGC
GGCGCCGCCG GGCACTTTCT CGACGCCCTG GTCGACACCC GCGACAGCGG CCAGCCCTCG
CTGCTCGAGC AGATGAATCA GATCGGCGTG TTGGCCTCGG TGATGCCCGA GTTCGCGCCC
TGCACCTGCC GCGTGCAGCA CGACCTCTAC CACGTGTACA CGGTCGACCA GCACCAGCTC
CTGACCGTGG CCATGCTCAA GCGCCTGGCC CGCGGCGAGC TGCGCGACAT CCACCCCACG
GCGACCGCCG CCATCGCCCA GGTCGAGCGG CCCGCGGCGC TGTTCCTCGG GACCCTGCTG
CACGACGTCG GCAAGCCGCT CGGCCACGGC CACGCCGAGA AGGGCGCGGT GCTCACGCGG
CGCATCGCCC TGCGCCTGGG CATGGACGAG CGCGACGTGA GCACGGCCGA GTTCCTCGTC
CGCCAGCACC TGACCATGGC CCACCTGTCG CAGCGCCGCG ACCTCTCCGA CCCCGACGTC
ATCAGCCGCT TCGCCGAGCG CGTGGGCGAC GCCCAGCGGC TCATCCAGCT CTACCTGTGC
ACGCTGTGCG ACACCGCCAT GACCGCGCCC GGCAACCTCA GCGCCTGGAA GGAGCAGCTC
CTCGAGGAGC TGTACACGCG CGCGCTGCGC TTTCTGCGCG GCCACGCCGG CGCCGCCGAG
ACCGACGTCG ACGAGCAGAT CCAAAGGACC CGCGAGCGCG TGCGCGTGCT CGTCGCCCAG
CCCGAGCCCG GACCGCCGGC GCCGGACGCG CCGGGCGAGG CCCCGAGCCC CGAGCCGCGC
AACAGCCGCG ACATCGAGGC CGCGCTGGGC GGCGTCGACG AGCGCCTGTT CGCGTCGCTG
TCGCCGCGGC AGCTCGCGCG CCTGATCAAG CTCGGTTGGG CCTGCGTCGA CTCCGGCAGC
TTGGCCGAGA GCGCGGTCGC CTTCTATCCG CTCAAGGGCC ACAGCGAGCT GGCCGTGGTC
GCCGAAGATC GCCACGGCCT GCTGTCGACC ATCGCGGCGG CGCTGTCGGC CGCGCGCATC
AGCGTGCTCG GCGCGGTCAT CGGCGCCGGC CACTTCGCCA GCACCGCCGA GGGCGACGAC
AGCGTGCGCA CCCTGGGCCT CGACATGTTC TTCGTGCGCG ATCTCGCGGG CGAGGCCATC
CCGGTCAACG ACGCCCGCTG GGCCAAGTTC AACGCCGAGC TGCTCAGCCT GCTCAGCGGC
GAGCAGGTGC GCGAGGCCGA GCGCCGCCTG CTCGCGCGCC GCCAGCAGTC GGGACTGGCG
CCGCGGGTGA CGCCCGGCGT GGGCACCAGC ATCCGCATCG ACAACAGCGC CTCGGCCGAC
GCGACCGTGA TCGACGTGCT CACCCAGGAC CGGGTCGGCG TGCTCCACGC CATCAGCCGC
ACGCTCTCGG ACTTCGGCCT CGATATCCAC CTGTCCAAAG TGTCCACCCA GGGCGAGCAG
GTCGCCGACA TCTTCTACGT GGTCAGTACC TCCACGCAGC GCAAGCTCGA GGACGACAGC
GCCATCGCCG ATCTCGAGCT GCGCCTGCAG GTCGCCCTCG AACAGGTATA A
|
|---|
| Protein sequence | MQPSQATPHS DALAARFTEA RAHALRALDE GVGGRAGCGL LAGACDDIVA ELWSAAEAAE
PSEAPLALVA TGGWGRRAVC PFSDLDFILL SKPRARDAAR RRADALIYPM WDARMRVGHA
VRTPREAAQL AGGDLATATA LLDLRHVAGD PALTEELTRS ARQILAPGGN ANEFVTRLAE
ERTRRHDKFG DSLYLLEPNL KHGIGALRDL DTALWAAKAR WSTGVPAELV TFGELTHRQG
RLLEDALDFL LMLRFRLQAQ AKRATDQLSF ESQEAIAAHL HPDATLPEGG IRPAVAPAVE
LLMRQYYLHA RDVVRLTDRV LEMARVPARR KPRVRRVDSV FLLFNGKLAV KDPDMLRHRP
AEMLRLFRVA LDLEVPVYSH TKELVAEHLA AHEGLLSRTR GAAGHFLDAL VDTRDSGQPS
LLEQMNQIGV LASVMPEFAP CTCRVQHDLY HVYTVDQHQL LTVAMLKRLA RGELRDIHPT
ATAAIAQVER PAALFLGTLL HDVGKPLGHG HAEKGAVLTR RIALRLGMDE RDVSTAEFLV
RQHLTMAHLS QRRDLSDPDV ISRFAERVGD AQRLIQLYLC TLCDTAMTAP GNLSAWKEQL
LEELYTRALR FLRGHAGAAE TDVDEQIQRT RERVRVLVAQ PEPGPPAPDA PGEAPSPEPR
NSRDIEAALG GVDERLFASL SPRQLARLIK LGWACVDSGS LAESAVAFYP LKGHSELAVV
AEDRHGLLST IAAALSAARI SVLGAVIGAG HFASTAEGDD SVRTLGLDMF FVRDLAGEAI
PVNDARWAKF NAELLSLLSG EQVREAERRL LARRQQSGLA PRVTPGVGTS IRIDNSASAD
ATVIDVLTQD RVGVLHAISR TLSDFGLDIH LSKVSTQGEQ VADIFYVVST STQRKLEDDS
AIADLELRLQ VALEQV
|
|---|
| |