| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3152 |
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| Symbol | |
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| ID | 8545540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4335582 |
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| End bp | 4337045 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646387819 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_003267547 |
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| Protein GI | 262196338 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.833452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.47191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCG CGCGCGAAAC CTCGCTGCAC GATGTCCGCA AGCTGGCGGC GCGTCGCTGC
TATGACGAGG CGCTGGCCGG CTACCGCGAG ATCTGCGCAC GCGACCCCTA CGACCCGGAT
CTGTGGCTAG AGCTGGCCAC GGTCGCCGAG TCCGCAGGAC GCGATACCGA CGCCATGGAG
GCGCTCGAGC ACGTGCTCGA CCTGTACGAG GGTACGGGCA TGGGAGAGGC CGTGGACGTG
GCCCTGCGGG TGCTCGAGCT GGCGCCCGGA CACGTGCAGG CGCGGCGCAT CGCGGCCGCG
TTTTCGCGCG GCCATCGGCC CGACGACAAC GGCGACAGCG GCGACGACGA CGGCGCCGTG
CCCGCGCCGG TGTGGGATCT GGATTTGGTA CCGGCGTCCG TCTCGCAGCC GGTCGCGGTG
CCGCTGGTGC CCGCGGTGCC CATGCCGGCG CCGGCCTCGG ACTCGCTGGC GACGCCGCGG
CCGCGGGCGC CCACGCTGTC GGTGCCGGTG CAGCGGCTGC CCTTTGCCGA GAGCGCGAGC
GCGCGGCCCA CGGCGATGCT GGCGCGCATG CTCGAGAGCG TGCGCGCGTC GCCGCTCCTC
GACGTGCTGG ACGAAGAAGC GCTGAGCTTT CTGGCCGAGG TCGGCGAGGT CCATCACCTG
CGCCGCGGCG AGTCGGTGGT GCGCGAGGGC GAGCGCGGCG ACAGTCTGTA CCTGGTGCTC
GACGGCAGCG TCGATGTCGA GCGCTACCAT CCGGTGCTGG GCACGGTGGT GCGGCTGTCG
ACGCTGTCGG CCGGCGCGTT CTTCGGCGAG CAGGCGCTGG TCGCCGGGGT GACGCGCTCG
GCCACGGTCA GGGCGCGGCG GCGCTCGGTG CTGCTCGAGC TCGACCGCCT GGCCATCCGC
TTCCTCAGCC GCCGCAGCGA CCAGGTGTTG GTCACCCTGA TGCGTTTCTT CCGCGCCCGC
ATGGTCGGCA CGCTCATGGC CACCTCGCCG CTGTTTCACC CGTTCTCGGC CGAGGAGCGC
CGCGCCATGG TCAGCCGGCT GCGGCTGCGC GAGCTGCCGG CGCAAGAGGT CGTGGTGCGC
GAGGGCGAGC GCGCGGGCGG GCTCTATCTG GTGCTCATCG GCACCCTGGT GGCCTTTGTC
GGCGACGAGA CCGGCGGCGC GCGCAAGCTC GGCGTGCTCG GCGCCGGCGA TGTGTTCGGC
GAGATGTCGC TGATCCGCGA TGAGCCGGCC ATGGCCAGCG TGGGCACGCA CACGCCGAGC
TGGATCCTGC GGCTGCCGCG CGAGGATTTT GCGCAGATGG TGGCCGCGCA CCCGGAGGTT
CTCGACCGGT TGGCCGATAT CGCCGCGATC CGCCAGGCCA AGAACCGCGG CGTGCTCGAG
GCGGCCGCGC CGGGGCTGGT GGGGCGAGAG CCCAGCGGTC CCCTGCGCCG GCGCGGGCTG
TCCAGGGACG ATGGCGAGGA CTAG
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| Protein sequence | MASARETSLH DVRKLAARRC YDEALAGYRE ICARDPYDPD LWLELATVAE SAGRDTDAME
ALEHVLDLYE GTGMGEAVDV ALRVLELAPG HVQARRIAAA FSRGHRPDDN GDSGDDDGAV
PAPVWDLDLV PASVSQPVAV PLVPAVPMPA PASDSLATPR PRAPTLSVPV QRLPFAESAS
ARPTAMLARM LESVRASPLL DVLDEEALSF LAEVGEVHHL RRGESVVREG ERGDSLYLVL
DGSVDVERYH PVLGTVVRLS TLSAGAFFGE QALVAGVTRS ATVRARRRSV LLELDRLAIR
FLSRRSDQVL VTLMRFFRAR MVGTLMATSP LFHPFSAEER RAMVSRLRLR ELPAQEVVVR
EGERAGGLYL VLIGTLVAFV GDETGGARKL GVLGAGDVFG EMSLIRDEPA MASVGTHTPS
WILRLPREDF AQMVAAHPEV LDRLADIAAI RQAKNRGVLE AAAPGLVGRE PSGPLRRRGL
SRDDGED
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