Gene Hoch_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3140 
Symbol 
ID8545528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4316022 
End bp4316498 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID646387807 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003267535 
Protein GI262196326 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.137854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.695529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAG ACACGAAGCG TTCGCCCCGC TCCGCGCGCC TGCCGGCATC GATCCGGCGC 
TTCACCCTGT GCGACGCCCC GGACCATCTC CTGCGCCGCT GCCATCAGCG TTCGGAAGAA
CTATTCACCG AGGCGATTGG CCATGACGGC CCGACGCGCC AGCAGATCGC GCTGCTGGTC
ACCGTCTGTC AGAATCCCGG GCTCAGCCAA GCCGAGCTGG TGAGCCGGAC CAGCATCGAC
AAAAACACGC TCTCGCAGAT GGTCAAGCGC CTCACCCAGC GCGGTCTGCT CAAGCGCCGA
CGCGCGCGCC ACGACGCCCG CGCCAACGCC ATCGACGCCA CGCCTGAGGC GGTGGCATTG
CTCGCCGAGG TCATGCCGCG CGTGCGTCGC GTGCAGAAGC AGCTCGTCGA ACCGCTGCCC
CAGGAGTTGC GCCCGGTGTT CATGCACTGC CTGCGCATCA TCGGCACGCG CGAGTGA
 
Protein sequence
MSRDTKRSPR SARLPASIRR FTLCDAPDHL LRRCHQRSEE LFTEAIGHDG PTRQQIALLV 
TVCQNPGLSQ AELVSRTSID KNTLSQMVKR LTQRGLLKRR RARHDARANA IDATPEAVAL
LAEVMPRVRR VQKQLVEPLP QELRPVFMHC LRIIGTRE