Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3140 |
Symbol | |
ID | 8545528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4316022 |
End bp | 4316498 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646387807 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003267535 |
Protein GI | 262196326 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.137854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.695529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAG ACACGAAGCG TTCGCCCCGC TCCGCGCGCC TGCCGGCATC GATCCGGCGC TTCACCCTGT GCGACGCCCC GGACCATCTC CTGCGCCGCT GCCATCAGCG TTCGGAAGAA CTATTCACCG AGGCGATTGG CCATGACGGC CCGACGCGCC AGCAGATCGC GCTGCTGGTC ACCGTCTGTC AGAATCCCGG GCTCAGCCAA GCCGAGCTGG TGAGCCGGAC CAGCATCGAC AAAAACACGC TCTCGCAGAT GGTCAAGCGC CTCACCCAGC GCGGTCTGCT CAAGCGCCGA CGCGCGCGCC ACGACGCCCG CGCCAACGCC ATCGACGCCA CGCCTGAGGC GGTGGCATTG CTCGCCGAGG TCATGCCGCG CGTGCGTCGC GTGCAGAAGC AGCTCGTCGA ACCGCTGCCC CAGGAGTTGC GCCCGGTGTT CATGCACTGC CTGCGCATCA TCGGCACGCG CGAGTGA
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Protein sequence | MSRDTKRSPR SARLPASIRR FTLCDAPDHL LRRCHQRSEE LFTEAIGHDG PTRQQIALLV TVCQNPGLSQ AELVSRTSID KNTLSQMVKR LTQRGLLKRR RARHDARANA IDATPEAVAL LAEVMPRVRR VQKQLVEPLP QELRPVFMHC LRIIGTRE
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