Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3138 |
Symbol | |
ID | 8545526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4314845 |
End bp | 4315606 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 646387805 |
Product | ABC-2 type transporter |
Protein accession | YP_003267533 |
Protein GI | 262196324 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00549881 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.763555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTGGT ACGGCGTTCG CGCGATTTAC CGCTTCGAGA TGGCGCGCAC CTTTCGCACC ATCACCCAGA GCCTGGCCTC GCCCGTGCTC TCGACCTCGC TCTACTTCGT CGTCTTCGGC ACCGCCATCG GCGGCCGCGT CGGCGATATC GACGGCGTGA GCTACGGCGC CTTCATCATC CCCGGTCTCA TCATGCTCTC GCTGCTGAGC GAGAGCATCT CCAACGCCTC CTTTGGCATC TACATGCCCA AGTGGTCGGG AACCATCTAC GAGCTGTTGT CGGCGCCGGT GTCGTATGTC GAAGTGCTGC TCGGCTACGT CGGCGCGGCG GCGACCAAAT CGATGCTCAT CGGCCTGCTC ATCCTGGCCA CGGCGCGGGT CTTCGTGCCC TACGAGATCG CCCATCCGCT GTGGATGCTG TGCTTTCTGC TGCTCACCTC GGTGAGCTTC AGTCTGTTTG GATTCATCAT CGGTTTGTGG GCCGATGACT TCCAGAAGCT GCAGGTGATT CCGCTGATGG TGGTCACCCC GCTCACCTTC CTCGGCGGCG CCTTCTACTC CATCGAGATG CTGTCGCCGA CCTGGCAGAC CATCGCGCTC TTCAACCCGG TGGTGTACTT GATCAGCGGC TTCCGCTGGA GCTTCTACGA GATTTCGGAC GTCAACGTCG CCATCAGCGC GGGCGCCATC CTGGGCTTCT TGGTGGTGTG CCTGGTCGCG GTCTGGTGGG TGTTCAAGAC CGGCTGGAAG CTCAAAGCCT GA
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Protein sequence | MNWYGVRAIY RFEMARTFRT ITQSLASPVL STSLYFVVFG TAIGGRVGDI DGVSYGAFII PGLIMLSLLS ESISNASFGI YMPKWSGTIY ELLSAPVSYV EVLLGYVGAA ATKSMLIGLL ILATARVFVP YEIAHPLWML CFLLLTSVSF SLFGFIIGLW ADDFQKLQVI PLMVVTPLTF LGGAFYSIEM LSPTWQTIAL FNPVVYLISG FRWSFYEISD VNVAISAGAI LGFLVVCLVA VWWVFKTGWK LKA
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