| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3114 |
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| Symbol | |
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| ID | 8545502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4287917 |
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| End bp | 4288441 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646387781 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003267509 |
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| Protein GI | 262196300 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.955368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTTC AGACCAGCGA AGAACCCCGG CCGCCCGAGT ACGGGCTGAC GCCGGCCGAT
ATCGAGCGGG CGTATCGCTC GCACGGGCAT CTGGTGCTGC GGCGCGCGCA GGTGTTGCTC
GGCAACGAGG CCGAGGCGCA GGAGGTGCTG CAGGAGATTT TCATGGCGCT GCTGCGCGAC
CCGGCGAGTT TTGGCGGCCG CGCGGCGATG ACTACCTGGT TGTATCGGGT GACCACCAAC
CGCTGCCTCA ACCGCATGCG CAACAGCAAG ACCCGGCAGC GCTTGCTCGA CGAGCAGATG
GGGCCCGAGC TGGGCGAGCC GCGGCAGGAC AGCGCCGACA CCTGGACCGT GGCGCGGCAG
TTTCTCGACC GCATGCCCGA TGAGCTGGCC CAGGTGCTGG TGCTGCACGC GGTCGATGGC
ATGACGCACA AGGAAATCTC CGACGTGCTG GGGTGCTCGC GCCGGCAGGT GGGAAATTTG
ATCGAGCGCG CGCAGGCGTG GGCGCGCGCG CAGGAGCTTG AGTAA
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| Protein sequence | MRLQTSEEPR PPEYGLTPAD IERAYRSHGH LVLRRAQVLL GNEAEAQEVL QEIFMALLRD
PASFGGRAAM TTWLYRVTTN RCLNRMRNSK TRQRLLDEQM GPELGEPRQD SADTWTVARQ
FLDRMPDELA QVLVLHAVDG MTHKEISDVL GCSRRQVGNL IERAQAWARA QELE
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