| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3095 |
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| Symbol | |
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| ID | 8545483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4265772 |
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| End bp | 4267499 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646387765 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003267493 |
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| Protein GI | 262196284 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.458911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCA TCGATCTTCG CATCGCCGAC CTGCTCGAGC TCGACCCGGG CGGCGGCGTG
TACCGCTTTG GCGGCCAGCG GGTGCTGCTG CTCGACGCCG TGGCCCTGGG GCTGCTGCGC
AAACAGCTCG TCGAGGCCTT TGGCCAACAC GCCGCGCGCG GGCTGCTCAC GCGGCTGGGC
TATTCGCACG GCTGGCGCGC GGCCGAGGCG CTGCGCGACA CCATCGCCTG GGACGACGAG
CGCGAGTGGC GCATCGCCGG CGGGCGCATC CACCGCCTGC AGGGGCTGGT GCGCTTCGAG
CCGGTGCCCG GAGACCGCGC CAACACGCTG GCGCAGGCGG TGTGGCACGA CTCCTACGAA
GCTGAGCAAC ACCTGCTGCA TGTGGGACGC TCGTCCGAAC CCGTGTGCTG GTCGCTGTGC
GGCTACGCCA GCGGCTACCT GAGCCGCGTG GTCGGACAGT CGGTCTACGC GGTCGAGGAG
AGCTGCGCCG GCTGCGGCGA CGCGGTGTGC CGCATGGTCG CCCGCACCGA GGCGCAGTGG
GGCGCGGACA TCGAGCCGCA CCTGGCCTAC TACGAGCGCG ATTGTCTCGA CGCCTCGCTG
CACAGCCTGC GCGACGCGGT GCGCAAGCTC GAGCGCCGGC TGCGCTCCCA GCGGCGCGCG
CTCGGCGCCG ACGCCGAGGT GCTCGAGAGC GGCGGCGTGG TCGCCCGCAG CCGCGCCATG
CGCCGGGTGC TCGAGCTCTG CCGCCGGGTC GCCGCGGTCG ACGCCACCGC CCTGGTCCAC
GGCGAGAGCG GCGTCGGCAA GGAGCGCGTG GCCCGCTACA TCCACGATCA CTCGCAGCGC
GCGGCCGGGC CCTTTATCGC CATCAACTGC GGCGCCATCC CCGAGCCGCT GCTCGAGAGC
GAGCTCTTCG GCCACGCCAA GGGCGCGTTC TCGGGCGCCA GCTCGGACCG CGTGGGCCTG
TTCGAGGCCG CCACCGGCGG CACCCTGCTG CTCGACGAGA TCGGCGACGT GCCCGCCGCC
ATGCAGGTGC GCCTGCTGCG GGTGCTGCAG GAACGCGAGG TCCGGCGCGT GGGCGAGAGC
CGGCCGCGGC CCATCGACGT GCGCGTGCTC GCAGCCACCC ACCGCGATCT GCGCGCCGAA
GTCGCCGCCG GACGCTTTCG CGAAGATCTC TTGTTCCGCC TGTGTGTACT CGAGATCGAG
ATTCCGCCGC TGCGCGAGCG CCCCGATGAC ATCCTGCCGC TGGCGCGCAT GAAGCTGCTC
GACACCGCCA CCCGCTACCG GCGCGAGGTC CGCGACTTCA CCCCCGAGGT CGCCAAATGG
CTCATCGCTC ATCCCTGGCC CGGCAACGTG CGCGACCTGC ACAACGTCAT CGAGCGCGCG
GTGGTGTTCG CTGAATCCGC GTGTATCGAG CTCGCCGACC TGCAGCTCGG CGCCGGCGCG
GCCAGCGCAG ATTCGCCCGC AGACCCCGGC CCGGACTCTC CGATCGCCGC TGGCGGCCCC
CAGGCGAGCG CGCGCACGGA CGCCGAGGCT GACGCGGCAA TCGCGACGCC CGCGGGCGCG
ACCCTGGCCG AGGTCGAGCG CGCCCACATC CTGGCCACGC TCGCGGCCTG CGGCGGCAAC
CGCTCGGAAG CCGCGCGCCG CCTGGGCATC GGCGCCGCGA CCTTGTTTCG CAAGCTCAAG
CGCTACGGCG TGCCGGGCCC GCGCCAGGAC CACGCCAAAC CCGCCTGA
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| Protein sequence | MRAIDLRIAD LLELDPGGGV YRFGGQRVLL LDAVALGLLR KQLVEAFGQH AARGLLTRLG
YSHGWRAAEA LRDTIAWDDE REWRIAGGRI HRLQGLVRFE PVPGDRANTL AQAVWHDSYE
AEQHLLHVGR SSEPVCWSLC GYASGYLSRV VGQSVYAVEE SCAGCGDAVC RMVARTEAQW
GADIEPHLAY YERDCLDASL HSLRDAVRKL ERRLRSQRRA LGADAEVLES GGVVARSRAM
RRVLELCRRV AAVDATALVH GESGVGKERV ARYIHDHSQR AAGPFIAINC GAIPEPLLES
ELFGHAKGAF SGASSDRVGL FEAATGGTLL LDEIGDVPAA MQVRLLRVLQ EREVRRVGES
RPRPIDVRVL AATHRDLRAE VAAGRFREDL LFRLCVLEIE IPPLRERPDD ILPLARMKLL
DTATRYRREV RDFTPEVAKW LIAHPWPGNV RDLHNVIERA VVFAESACIE LADLQLGAGA
ASADSPADPG PDSPIAAGGP QASARTDAEA DAAIATPAGA TLAEVERAHI LATLAACGGN
RSEAARRLGI GAATLFRKLK RYGVPGPRQD HAKPA
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