Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3094 |
Symbol | |
ID | 8545482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4264322 |
End bp | 4265674 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646387764 |
Product | beta and gamma crystallin |
Protein accession | YP_003267492 |
Protein GI | 262196283 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.439475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCTT CGCGATATCG CACGATATTC AACCGCTATT TGTCCAACCT ATTCACCAAA GCAGCGATCA TGAACCGTTA TCGAACCCGT CTGCCCCAGC GCAGCGCCCT GCTCTTCGCG CTCGCGCTCA CGAGCGCGAG CTGTGTGCTC GAAGCCCCTG AGCTCGATGC CGAACTCGCC CTCGGCGAGA TGCAATACAG CATCGTGAGC ACCCACGACC TGGCCAAACG CTGGGCGCCC ATCCACTACA TGGACGTCGA CGCCACCGGC ACCTACGCCG AGGGCGGACG CTCGGACTAC ATCACGGCCA TCGACTACGA CGGCGACTGG GACGCGCAGA ACAACTGGAA CAACCTGCCG CAGCACGCCT CGTCGCTGGC CGCCTACGGC TACTACTCGG TGGTCGAGAC CGCCACGCAT TGGTTCCTCA GCTACGCCTT CTTCCACCCG CGCGACTGGA CCGATATCTT CTTCCTCTAC GAGCTCGACC AGCACGAAAA CGACCTCGAG GGCGTGCTCA TCATCGTCGA AAAGGACGGC TCGAGCTACG GCCGCCTGCT GGGCGCGGTC ACGGTGAGTC ACTCGGACTT CTTCTCCTAC GCGAGCGCGG GCAGCAGCCT GAGCAGCGGC CTCGAGAACA TCGACGGCAC CTTGCACACC CAGAGTCACG CCGGCGCCCA GCACCCGGTG ACCGCGCAAG AAGCCAAGGG CCACGGGCTC AAGGCCTGGC CGCAGTACGA CATCAACGGC GACGGCATCG TCTACTACCC GTCGATGAGC GACAACGCCG AGGTCCCGTC CGGCAATTCC GACAGCTACG TCGAATACGA GCTGATCGAC ATCTTCGAGG TCGGCGGGCT GTGGGACCAG CGCTTCAACA CCAGCCTGTT CTACAACGCC GGCGGCGGCT TCAAGGGCAA CGACTTTGGC GACGGCGGCG CCAACGCGCC CTGGGCGTGG AACGACGGCG ACGACGGTGT GATCCAGGGC GGCGAGATCG CCACCGACCC GGCCAAGCTG GTCGACAACT ATTTCGACGG CGTGGGCGAT TTCTCCCACG TCTACACCAG CAACCCCTAC GGCAACGCCG GCGGCCCCGT GACCGTGTAC CAGCACTGCA ATCTCGCCGG CTACGCGGTC ACGCTAGCGC CGGGCGCGTA CACGCTCGCC GACCTGCAGG CGCGCGGCAT CGCCAACGAC GATCTGTCGT CGCTGCGCAT CGAGAACGGC CGCCGGGTCA CGCTCTACCA GCACGACAAC TTCGGCGGCA GCTCTGTGGT GTTGCAGGGC AGCGACGGCT GCCTCGGCGA CGAGGGCTTC AACGACGAGG TCAGCTCGCT GCGCATCGAG TGA
|
Protein sequence | MIASRYRTIF NRYLSNLFTK AAIMNRYRTR LPQRSALLFA LALTSASCVL EAPELDAELA LGEMQYSIVS THDLAKRWAP IHYMDVDATG TYAEGGRSDY ITAIDYDGDW DAQNNWNNLP QHASSLAAYG YYSVVETATH WFLSYAFFHP RDWTDIFFLY ELDQHENDLE GVLIIVEKDG SSYGRLLGAV TVSHSDFFSY ASAGSSLSSG LENIDGTLHT QSHAGAQHPV TAQEAKGHGL KAWPQYDING DGIVYYPSMS DNAEVPSGNS DSYVEYELID IFEVGGLWDQ RFNTSLFYNA GGGFKGNDFG DGGANAPWAW NDGDDGVIQG GEIATDPAKL VDNYFDGVGD FSHVYTSNPY GNAGGPVTVY QHCNLAGYAV TLAPGAYTLA DLQARGIAND DLSSLRIENG RRVTLYQHDN FGGSSVVLQG SDGCLGDEGF NDEVSSLRIE
|
| |