| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3071 |
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| Symbol | |
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| ID | 8545459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4235489 |
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| End bp | 4238692 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387742 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003267470 |
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| Protein GI | 262196261 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.192813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.491387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACCA CTCGATCAAT ACGATATCTG GCGTTGGCGC TGCTCGTCAG CGTGCCCGCG
GGCTGTAGCA CGCCGCGCGA CAGCGGCGAC GACGGCGACA GCGACGGCGT CGAACTCGCC
GACAAGCGCG GCACCGAGGC CAGCAAACGC GGCCAGGAGG TGCACGGCAC CATCATCGCC
GACCTGCCGG CCATAGACGG CTCGCAGAAC GGACCGCTCG TACCCGTCCC CGACGTCCGC
GTATGGGTCA AGAACGTGTC GAGCGGCGTG CAGAGCGACC CGGTCGAGAG CGATCTCGCC
GGCCGCTACA TCATCCCGCG CCAGTACGAG GGCGATTACC TGCTGTGCTG GGACAAAGAC
GGCTGGGAGG CCGCGTGCAC GCGCGAGCCC TTCCGCCTGA GCAAGACCAC CTACTTCCCC
GGCCTCACCA AGATCGCGCC CGAGCGCGAC GACGGCAGCA GCGACACCGG CGTGATCCGC
GGCCGCGTGC AGCTCGCCGA CGAGACCTCG TGCTGGTACG AGAGCGAGTT TTTCGCGCGC
GAGGAGACCG CGCGCGTCGA GCTGCTCAAC ATTTTCGGCC AGGTGGTCCA GGACATCCGC
GCCAACGACC ACGGCGACTT CGTGCTCACG CACGTGCCCT ACAGCTACTT CCAGGTGCGC
AGCACCTGCG GCGAGGAGGT CCGGCGCGCC GGCCTCAGTT ACAGCGGCGT GGACATGTCC
GGGGCCACGC CCATCGCTGC CCAGGAGCTG CCCAACCGAC GCCCGTCGGT GCACACCGCG
GTGGCCTACG CCGACGGCGA GGGCGTGCGT CACGTGCGCG CCGGTGAGAT CGTCGAGGTC
GTGGCCGAGG CCAGCGACCC CGACGGCGAC GATCTGCGCT TCGAGTGGAA GGTGCAGGAG
GGCTCGGGCG AGCTGAGCAG CTCGAGCAGC GACGCGGTCG GCTGGCGGCT GCCCGAGGCG
CCCGGCCTGC ACAGCCTGTA CGTGGTCGCC AGCGACGATC GCGGCGGCGT CCACCAGCAC
AAGATCACGC TCGAGGTCGA GTCGCGCGAG GTGCTGTTCT CGGGCAAGGT CCTGGGCAGC
GACGGCGCCG AGCTCGCGGG CGCCGTGGTC ACGGTCAACG GCAGGACGGC CGAGGCCGGG
CAGGGCGGCG CGTTCGCGCT CTCGCTCGAG CGCAGCGACT CCTACACCCT GCACATCGAG
GCCGAGGGCT ACGCCGAGCT GGGCAAGCGC GTGGACCTCG CGCTCAGCGG CAACCGCTGG
GTGCTCACCC GCGCCCACCG CCAGACCATC GATCCCACCA TCGAGAACGT CATCATCGAC
AAGCGCAAGG ACTGGCTCAA CCCGCGCGAC GACAAGGAGT ACCGGCGTCG CCCGGCGCGC
GTGACCCTGC CCGCCGATGC CCTGGTCGAC GCCGAGGGTC GCCGCGCCGA TCCGGCCAAC
GGCCCGTACT CGGCGTACAT CGCCACCATC GACCCCACCG GCGAGATGAT GGCCGGCGAC
TTTGGCGCGC GCAATCTCGA CGGTGAGAGC CCCTACCTGG TGTCCTTTGG CGCCTTGTTC
ATCGAGGTGC GCGACGCCGC CGGTCGCACC TACAACCTGG CCGAGGGCGA GCGCGCGCTG
CTCGAGAGCC CCATCCAGGA TCCGCTGCTG CAGGAGGACG TGCCGTCCGA AATCGACATG
TGGACCTTCG ACCCGGACAG CGGCGACTGG CTGCAGGACG AGATCAACGC GCGCCGCGAC
GGCGACGTCT ACGTGACCGA GCTGGCCAGC TTCTCCACCC ACAACGCCGA CCTGCAGAAG
ACCGATCCGG CGTGCGTGCG CGTCGTCGCC AGCCCGGCGC TGCTGGCGCT CGGCGACCTG
GTGGCGCGCA TCGACGTGGC CACCGGCCCC AGCAGCACGC GCCGCTACGC GGTCAACATC
GACGACCAGA ACAACGTGCT CTACAACCTG CCCGACAACG CTCCCTTCAC CCTCGAGCTG
TTCCAGGGCG TGGCGCCGAA CGACGTGCTC ATCCACGCCG AGCCGGGCAA CACCGGCAGC
CCGTGGTCGG CCACAGCCGG CGCGCCGCCG TATCCCTACT CGGCCTGCGA CGCCACCGTG
ACCCTCGACG TGCCCGCGCT GCCGCCGGCG TTCCTGCAGT ACAGCAAGGG CACCGGCTCC
GCGGCCCAGG CCGCCGGCTA CTATGCGGCC ATCGACCCGC TGGACGAGCG CACCACGCTC
GGCGACTGGT GGGCCATCAA CGGCTTCGAC CCGAGCACGG GCGCCGGCGG CGTGCGCGCC
TCCTTCGGCA ATGACAACGA CCTCGGCTTT GGCCGCGACA TGCACTGCCT GAGCAGCGGC
GCCGACGTGG CCTGCTTTGT GACCAATTAC GGACAGCCGG ACCAAGACCC CGGCAACGCC
GACCAGGCCC TGCTCGCCGA CACCACCCAG GCCGTGGCCA CCGTGACCAT GGAGTACTCG
GCCGTGCCCG GGTATTCGTC CTCCGATCGC ATCGTCAAGT TCTACGTCTA CCAGGGCGGC
GGACCCAGCG GCGTGCGTCT CGACAGCGCC GACCTCGACA AAACCGGGCC CAAGTTCGTG
CCCAACCTGT GCCTGGTGTG CCACGGCGGC AACTACAACC CCGTGGATCC CGCCAACCCG
AGCTTCAGCG AGATCAACGC CGGCGCCAGC TTCCGCGAGT TCGACACCCA CTCGTTCACC
TATCCGGGCG CGTCGCCGCA AGCCGACCAG GAGGACGAAT TCTACGACCT CAACCAGCTC
GTGCTGCTGA GCAACCCGGC GCCCGCGATC GTCGAATTGG TCGGCCAGTT CTACGCCAAT
GGCCAGACCG TTGATGCCAA CGCTGTGCCC GCGGACTGGC AGGCGGCGCA GACCAGCGGC
TCGAACCTGC CCGCGGGTCT GTACCTGGAC GTGGTCGGCA AATCCTGCCG CACCTGCCAC
GTGGCCCAGC CCGACTACAA CCCGCTCGCG CTCAATAACA GCGCCTACCC CGACTGGAAC
AGCTACAGCA TGTTCCGCGA TGTCCGCCAG TTCTCGCACT TCCTGGTGTG CGACGCCAAG
ATCATGCCCA ACGCGCTGGT GACCTTCAAA AACTTCTGGC TCAGCCTGGG GCCGCATCGG
CCCGAGCGCT TCGCCGACTT TGTCGACCCG GCGTCCGGCT GGCCGAGCTC GTTGAGCAAC
GACATCGGCC CCTGCGCGCC CTGA
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| Protein sequence | MSTTRSIRYL ALALLVSVPA GCSTPRDSGD DGDSDGVELA DKRGTEASKR GQEVHGTIIA
DLPAIDGSQN GPLVPVPDVR VWVKNVSSGV QSDPVESDLA GRYIIPRQYE GDYLLCWDKD
GWEAACTREP FRLSKTTYFP GLTKIAPERD DGSSDTGVIR GRVQLADETS CWYESEFFAR
EETARVELLN IFGQVVQDIR ANDHGDFVLT HVPYSYFQVR STCGEEVRRA GLSYSGVDMS
GATPIAAQEL PNRRPSVHTA VAYADGEGVR HVRAGEIVEV VAEASDPDGD DLRFEWKVQE
GSGELSSSSS DAVGWRLPEA PGLHSLYVVA SDDRGGVHQH KITLEVESRE VLFSGKVLGS
DGAELAGAVV TVNGRTAEAG QGGAFALSLE RSDSYTLHIE AEGYAELGKR VDLALSGNRW
VLTRAHRQTI DPTIENVIID KRKDWLNPRD DKEYRRRPAR VTLPADALVD AEGRRADPAN
GPYSAYIATI DPTGEMMAGD FGARNLDGES PYLVSFGALF IEVRDAAGRT YNLAEGERAL
LESPIQDPLL QEDVPSEIDM WTFDPDSGDW LQDEINARRD GDVYVTELAS FSTHNADLQK
TDPACVRVVA SPALLALGDL VARIDVATGP SSTRRYAVNI DDQNNVLYNL PDNAPFTLEL
FQGVAPNDVL IHAEPGNTGS PWSATAGAPP YPYSACDATV TLDVPALPPA FLQYSKGTGS
AAQAAGYYAA IDPLDERTTL GDWWAINGFD PSTGAGGVRA SFGNDNDLGF GRDMHCLSSG
ADVACFVTNY GQPDQDPGNA DQALLADTTQ AVATVTMEYS AVPGYSSSDR IVKFYVYQGG
GPSGVRLDSA DLDKTGPKFV PNLCLVCHGG NYNPVDPANP SFSEINAGAS FREFDTHSFT
YPGASPQADQ EDEFYDLNQL VLLSNPAPAI VELVGQFYAN GQTVDANAVP ADWQAAQTSG
SNLPAGLYLD VVGKSCRTCH VAQPDYNPLA LNNSAYPDWN SYSMFRDVRQ FSHFLVCDAK
IMPNALVTFK NFWLSLGPHR PERFADFVDP ASGWPSSLSN DIGPCAP
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