Gene Hoch_3068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3068 
Symbol 
ID8545456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4232386 
End bp4233252 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content73% 
IMG OID646387739 
ProductMethyltransferase type 12 
Protein accessionYP_003267467 
Protein GI262196258 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.448728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC ATGCCGAGCG CGTCGCCCAC TACTACGACA GCAACACCCG CCGCTTCCTG 
CGCTTTGGCG AGGGCTCGAG CGGCGGCGCC ATCCACCGCT GCGTGTGGAC CCCGGACGCC
CACAGCGAGG CCGAGGCCGT GGACACGGTC AACCGCCTGC TCATCGAGCG CCTGCGCCCG
CACCTGGCGA CCGCCACCGG CGCCGGCCAC ATCCTCGATC TGGGCTGCGG CGTGGGCGCG
ACCATGGTGC GGCTGGCCGA GGCCCTGGAC GCGGAGCTGA GCGGCGTGAC CATCAGCCGC
GTGCAGGCCG AGCTGGGCGA GCGCCGCTTC GCCGAGCTGG GCCTGAGCGA GCGCTGCCGC
ATCCTGTGTG CCGACTTCGC CGCCTTGCCC GCGCAGCCGC GTTACGATGC CATCGTCGCC
ATCGAGGCCG TGGTCCACGC GTCCGATCTC GCCGCCCTGA TGACGTCCCT GGGCGAGCGC
CTGCGGCCGG GCGGTCGCGT GCTCCTGATC GACGACTGGA TGACCGATCA CGAGCGCGGC
CTGGCCGCGC GCGAGCGTTG TCTGGCGCAG TTCCGGGCCG GCTGGCGCAT CGGCAGCCTG
CACTCCGTGG CCGAGGTCGC GGCCATGGCC GCGGACGCCG GTCTGCGCCT GGACGAGGAT
CTCGACCTCA CGCCGCACCT GCGTCTGGGG CGTCCGCGCG ACCGTGTCAT CGAAGCCCTG
GTCGGCACGG TAGGGCGGCT GCCGGGCCTG GGACGGCGCG CGGTGGAGGT GCCCTTCTGG
GGCAATATGA GCGGCGGCTC GGCGCTGCAG ACCGGTCTGC GCCGCGGCTG GCTGGCGTAT
CGTTTGCTGA GCTTCCAGCG CTGCTGA
 
Protein sequence
MSQHAERVAH YYDSNTRRFL RFGEGSSGGA IHRCVWTPDA HSEAEAVDTV NRLLIERLRP 
HLATATGAGH ILDLGCGVGA TMVRLAEALD AELSGVTISR VQAELGERRF AELGLSERCR
ILCADFAALP AQPRYDAIVA IEAVVHASDL AALMTSLGER LRPGGRVLLI DDWMTDHERG
LAARERCLAQ FRAGWRIGSL HSVAEVAAMA ADAGLRLDED LDLTPHLRLG RPRDRVIEAL
VGTVGRLPGL GRRAVEVPFW GNMSGGSALQ TGLRRGWLAY RLLSFQRC