| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3037 |
|---|
| Symbol | |
|---|
| ID | 8545425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4195388 |
|---|
| End bp | 4195810 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646387708 |
|---|
| Product | transcriptional regulator, BadM/Rrf2 family |
|---|
| Protein accession | YP_003267436 |
|---|
| Protein GI | 262196227 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0850205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0637493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC GCTTCGCCGT CGCTGTCCAC ATCCTCACCC TCCTGCAGGC GCAGGCGGGC
GAGCCGGCCA GCTCCGAGTG GATCGCGGGC AGCGTCAACA CCAACCCGGC GCTCATCCGC
CGGCTGCTCT CGCAGCTCGC CAAGGCCGGG CTCACGCGCT CGCAACGCGG CGCGGGCGGC
GGCGCGCTGC TGGCGCGCAG CGCCGATTCC ATCACCCTCG CCGACGTCTA CCAGGCGGTC
AGCGATGACG CCGATGTCAT CCCCATCCAC GCCGCGCCCA ACCCGAAATG CCCGGTCGGG
CGCCACATCG AGAGCGCGCT CGCGGTGCAC CTCCAGGCCG CCGAGCAGGC GCTGCAAGTC
GAGCTGGCGC GGACCACGAT CGCCTCGCTC ACCCAGGACA TCTTCCGCCG CGCAACGCGC
TGA
|
|---|
| Protein sequence | MNTRFAVAVH ILTLLQAQAG EPASSEWIAG SVNTNPALIR RLLSQLAKAG LTRSQRGAGG
GALLARSADS ITLADVYQAV SDDADVIPIH AAPNPKCPVG RHIESALAVH LQAAEQALQV
ELARTTIASL TQDIFRRATR
|
|---|
| |