Gene Hoch_3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3036 
Symbol 
ID8545424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4194372 
End bp4195217 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content72% 
IMG OID646387707 
ProductNmrA family protein 
Protein accessionYP_003267435 
Protein GI262196226 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.137458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0657403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA TCGCCATCAC CGGATCCACT GGACAGCTCG GCCGCCTCGT CATCGACAAG 
ATCAAGAACG CGGGACGCGG CGACGACCTC ATCGCCCTGG CGCGCACGCC GGAGAACGCC
GCCGACCTGG GCGTTTCCGT CCGCGCGGCC GACTACGATC GCCCCGAGAC CCTGGGTCCG
GCGCTCGCGG GCGTGGACAC GCTGCTGCTC ATCTCGGCCA GCGAGGTCGG CAAGCGCGTG
CCCCAGCACC AGAACATCAT CGACGCGGCC AAGGCGGCCG GCGTCGGCCA CATCGTCTAC
ACCAGCGTGC TGCACGCCGA CACCTCGAGC ATCGGGCTGG CCGACGAGCA CCGGGCCACC
GAGGCCGCGC TCGCTGCCTC GGGCGTGCCG TACACGCTGC TGCGCAACGG CTGGTACACC
GAGAACTACG GCGGTGGCAT CGCCTCGGCG CTCGAGCACG GCGCCCTGGT CGGCAGCGCC
GGTGAGGGCA AGATCTCGGC GGCGCCGCGC GCCGATTACG CCGAGGCCGC GGTGGCCGTG
CTGCTCTCGG AGGAGCTGCG CGGCACAACC TACGAGCTGG CCGGCGACAG CAGCTTCACG
CTGGCCGAGC TGGCCGCCGA AATCTCGCGC CAGACCGGCC GGGAGATTCC GTATCAGAAC
CTGCCGGCCG AGAAATACGG CGAAATCCTC ACCCAGGCCG GGGTGCCGGC CGGGTTCGCG
CAGGCCATCG CCGGCTGGGA CCTGGCCACG GCCGAGGGCG CGCTCTTCGA CGACGGCCGC
CAGCTCTCGC AGCTCATCGG CCGACCGACC ACGCCGCTCG CCGACGTGGT CGCCACCACC
CTGTAG
 
Protein sequence
MNTIAITGST GQLGRLVIDK IKNAGRGDDL IALARTPENA ADLGVSVRAA DYDRPETLGP 
ALAGVDTLLL ISASEVGKRV PQHQNIIDAA KAAGVGHIVY TSVLHADTSS IGLADEHRAT
EAALAASGVP YTLLRNGWYT ENYGGGIASA LEHGALVGSA GEGKISAAPR ADYAEAAVAV
LLSEELRGTT YELAGDSSFT LAELAAEISR QTGREIPYQN LPAEKYGEIL TQAGVPAGFA
QAIAGWDLAT AEGALFDDGR QLSQLIGRPT TPLADVVATT L