Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3031 |
Symbol | |
ID | 8545419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4189030 |
End bp | 4189740 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646387702 |
Product | DNA alkylation repair enzyme |
Protein accession | YP_003267430 |
Protein GI | 262196221 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.479506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0579972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG ACGACATCCT GCGCGACCTC CACGCCGCGG CCGATCCCGA AGTCGCCCGC CGCAGTCAGC GCTTCTTCAA GACCGGGCCC GGCGAGTACG CGGCCGGCGA TCAGTTCATC GGCGTGCGCC TGCCGGTGCA GCGCAAGCTG GCGCGGCGCT ATCGCGATGT ACCGCTGGAC GCGCTGGAGC CGCTGCTCGG CAGCGCCATC CACGAGCACC GGCAGACCGC GCTGCTGATC CTCGAGCAGG CCTTCGGACG CGTGGACGAG GACCAGCAAC GCGCGATCTT CGAGTTCTGC TGCCGGCACC TGGCGCGTAT CGACAACTGG GACCTGGTCG ATCAGGCCGC GCCCAAGATT CTCGGCCCCT ACATCCTCGC GCAGCGCGAA CACCTACCCA TGCTGTACCG GCTGGCGCGC TCGTCCGCTC TCTGGGAGCG CCGCATCGCC ATCATGTGCA CCTTCGCGTT CCTGCGCGCC GGCCACTTCG ACGACACCCT GGCCATCGCC GAAATTCTCG TGCGCGACGA GCACGATCTC ATCCACAAGG CGGTCGGATG GATGCTGCGC GAGCTCGGCC AGCGCGCGCT CGAACGCGAA CGCGCCTTTC TCGACCGCCA CGCCGGTCAC ATGCCGCGCA CCATGCTGCG CTACGCGATC GAAACGTTTC CGGCCGAGCT GCGCGCGCAC TACATGCAGC TCGGCCGCTG A
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Protein sequence | MSADDILRDL HAAADPEVAR RSQRFFKTGP GEYAAGDQFI GVRLPVQRKL ARRYRDVPLD ALEPLLGSAI HEHRQTALLI LEQAFGRVDE DQQRAIFEFC CRHLARIDNW DLVDQAAPKI LGPYILAQRE HLPMLYRLAR SSALWERRIA IMCTFAFLRA GHFDDTLAIA EILVRDEHDL IHKAVGWMLR ELGQRALERE RAFLDRHAGH MPRTMLRYAI ETFPAELRAH YMQLGR
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