Gene Hoch_3031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3031 
Symbol 
ID8545419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4189030 
End bp4189740 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID646387702 
ProductDNA alkylation repair enzyme 
Protein accessionYP_003267430 
Protein GI262196221 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.479506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0579972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG ACGACATCCT GCGCGACCTC CACGCCGCGG CCGATCCCGA AGTCGCCCGC 
CGCAGTCAGC GCTTCTTCAA GACCGGGCCC GGCGAGTACG CGGCCGGCGA TCAGTTCATC
GGCGTGCGCC TGCCGGTGCA GCGCAAGCTG GCGCGGCGCT ATCGCGATGT ACCGCTGGAC
GCGCTGGAGC CGCTGCTCGG CAGCGCCATC CACGAGCACC GGCAGACCGC GCTGCTGATC
CTCGAGCAGG CCTTCGGACG CGTGGACGAG GACCAGCAAC GCGCGATCTT CGAGTTCTGC
TGCCGGCACC TGGCGCGTAT CGACAACTGG GACCTGGTCG ATCAGGCCGC GCCCAAGATT
CTCGGCCCCT ACATCCTCGC GCAGCGCGAA CACCTACCCA TGCTGTACCG GCTGGCGCGC
TCGTCCGCTC TCTGGGAGCG CCGCATCGCC ATCATGTGCA CCTTCGCGTT CCTGCGCGCC
GGCCACTTCG ACGACACCCT GGCCATCGCC GAAATTCTCG TGCGCGACGA GCACGATCTC
ATCCACAAGG CGGTCGGATG GATGCTGCGC GAGCTCGGCC AGCGCGCGCT CGAACGCGAA
CGCGCCTTTC TCGACCGCCA CGCCGGTCAC ATGCCGCGCA CCATGCTGCG CTACGCGATC
GAAACGTTTC CGGCCGAGCT GCGCGCGCAC TACATGCAGC TCGGCCGCTG A
 
Protein sequence
MSADDILRDL HAAADPEVAR RSQRFFKTGP GEYAAGDQFI GVRLPVQRKL ARRYRDVPLD 
ALEPLLGSAI HEHRQTALLI LEQAFGRVDE DQQRAIFEFC CRHLARIDNW DLVDQAAPKI
LGPYILAQRE HLPMLYRLAR SSALWERRIA IMCTFAFLRA GHFDDTLAIA EILVRDEHDL
IHKAVGWMLR ELGQRALERE RAFLDRHAGH MPRTMLRYAI ETFPAELRAH YMQLGR