| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3020 |
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| Symbol | |
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| ID | 8545408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4176617 |
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| End bp | 4178248 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387692 |
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| Product | hypothetical protein |
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| Protein accession | YP_003267420 |
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| Protein GI | 262196211 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0806492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.54712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAT TGCGACAGGT ATCGGCCTTC CTGGGGCTGA GCGCCATCTT CCTGGGCGGC
TGCACGCTGC CGGCGGACGA CGCTATTGCG CGCGATGAGG CGCCGCTCGC CGCCGACTGC
ACGGCGCTGG GCGCGAGCAT CATCAGCCAC GTCTGTTTCC ACGCCAACTA CGGGCCGTTC
CAGAGCGTCA CGGGCAGCTC GAGCACCAGC TTCAGCGGCA GCTCGCCCAA CGTCAACGCG
ACCCACACGC ACCACACTGT GTCGCTGCCG GGCTCCCTCG GCAGCAATCA GGGCACGGTG
AAGTTCACGC CCGGCTCGAG CGGTGACTGG GCCATCTTCC TCGAGCCCGA TGTATCGCTC
CAGGTGCTCG ACGCCAGCGG GTCGGCGCTC TCGGTGCTGC TCACGCACAC CATCCCCTCG
GGCGACTGCA GCGAGCTCTC GCGCGTGGCC GTGGTCAACA TGAGCGCGAG CAACACCTAT
CGCCTGGTGC TCGGGCCCTC GTCTTCGGTG TCGAGCGTGG GTGTCGTTCT CGAACGAGTG
GACGATTTCA ACGCCTTCTA CTTCGAAGAC GCCGATGGCG ATGGCTACGG TGACACCGAC
GAGCTGTTGC TGACCGCGTG CGAGCCACCG GCCGACTACG TCAGCGACGA CACTGACTGC
GACGACAGCG ACGACGAGGT CTACCCGGGC GCGGCCGAGG TCTGCGACGG TCTCGACAAC
GACTGCAACG GCTCGGTCGA CGACGGCATC GGCACCTGCA GCGCGGGCGC GCGCTCGGCG
CACGACGCAG CCGCGGCCGC GGTCGCGCAC TCGGACGCCA GCGGCGACCA GCAGCTATCC
TGCTTCTGCG ACTGCGAGGG CGATCCGGAT AGCTGCAGCG TGTATTACCG CGACCGCGAC
CCCGCCATCC ACCCCGAGGC CGAGGAGATC TGCGACGGCG TGGACAACGA CTGCGACGGC
ACGCTCGACA TTCTGCCGGA CCCGCTGGAC GAGGTCATCG AGCATAGCTG CGACCACGCC
GAGCTCGGCC CCTTCGTCCA GGTCAGCGCC AGCGCGGTCG GCGCCGCCAG CTCGCCCAAT
GTCAACGCAG CGCACACGGG CTACGTCATC AGCTTGCCGT CGGCGAGCGG CGGGTTCGCG
GGCCAGGTTC GCTACCGCCC GGTGGAGAGC ACCGATTACG CGCTGATGAT CGACCCCGGC
GTGTCCGTGA GCGTGTTCGA CGCCAGCGGT GTCGAGGTCG AGATCGAGCT GCAGCGCGAC
GCCACCGCCT GCCCTGCCCT CACCCGGCTG GATCTCGTCG AGCTCGAGGA GCTGGTGAAC
TACCGGCTGG TGTTCGAGTC CGCGAGCGCG GCCGAGGTCC TGCTGGTCGT CGAGGAAGCC
GCCCACGAAC ACGGGGACGA CGAGGATGAG GACAGCGGCG CGCTCGAGTT CTTCGCCGAT
GAGGACGGCG ACGGTTTCGG CAGCCCGGAC GAGGTCGTCG ACGCCTGCGT CGCACCGCCC
GGCCACGTCG CCGATGACGG CGACTGCGAC GACGCGGACG CAAGCGTCCA CCCGGGGGCG
AGCGAGCTGT GCGACGGCAT CGACAACGAC TGCGACGGCG TCATCGACGC CTTCTGCGAA
TCGTCGCGAT GA
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| Protein sequence | MKRLRQVSAF LGLSAIFLGG CTLPADDAIA RDEAPLAADC TALGASIISH VCFHANYGPF
QSVTGSSSTS FSGSSPNVNA THTHHTVSLP GSLGSNQGTV KFTPGSSGDW AIFLEPDVSL
QVLDASGSAL SVLLTHTIPS GDCSELSRVA VVNMSASNTY RLVLGPSSSV SSVGVVLERV
DDFNAFYFED ADGDGYGDTD ELLLTACEPP ADYVSDDTDC DDSDDEVYPG AAEVCDGLDN
DCNGSVDDGI GTCSAGARSA HDAAAAAVAH SDASGDQQLS CFCDCEGDPD SCSVYYRDRD
PAIHPEAEEI CDGVDNDCDG TLDILPDPLD EVIEHSCDHA ELGPFVQVSA SAVGAASSPN
VNAAHTGYVI SLPSASGGFA GQVRYRPVES TDYALMIDPG VSVSVFDASG VEVEIELQRD
ATACPALTRL DLVELEELVN YRLVFESASA AEVLLVVEEA AHEHGDDEDE DSGALEFFAD
EDGDGFGSPD EVVDACVAPP GHVADDGDCD DADASVHPGA SELCDGIDND CDGVIDAFCE
SSR
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