| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3011 |
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| Symbol | |
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| ID | 8545399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4167791 |
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| End bp | 4169425 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387683 |
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| Product | All-trans-retinol 13,14-reductase |
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| Protein accession | YP_003267411 |
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| Protein GI | 262196202 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG GACGTTCGTA CAAACAACAC GGCATCGAGG GCAGCTACGA CGCCATCGTC
ATCGGCTCCG GCATCGGCGG ACTCACCGCG GCCGCGCTCC TGGCCAAGCA CGGCGGCAAA
AAGGTATTGG TGCTCGAGCG CCACTACACC GCCGGCGGTT TCACCCACAG CTTCTCGCGG
CCCGGCTACG AGTGGGACGT GGGCGTGCAC TACATCGGCC AGACGCAGCC GCGTACGCTG
CTGCGCAGAG CCTTCGACGA GCTCAGCGAC GGCCAGCTCG CGTGGGCCGA CATCGGCGAC
GGCTACGACA CCATCGTCGT CGGCGACGAG CGCTATCCCT TCCCGGCCGG TCGCGAGCGC
TGGCGCCAGG CCATGCACGG CTGGTTTCCC CGCGAGCACG CGGCCATCGA CCGCTACATC
GAGCTCATCC GCGAGAGCGC GCGCGACTCG CAGCTCTTCT TCGCCGAAAA AGTGCTGCCG
CGGCCGCTCT CGGGCACGGT CGGCGGGGTG CTGCGGCGCA AGGCCATGCG CTTGGCGCGC
CGCACCACGC GCGAGGTGCT GAGCGAGCTC ACCAGCGATG AGCGCCTGAT CGGCGTGCTC
ACCGGCCAGT ACGGCGACTA CGGCCTGCCG CCGGCAGAGT CGAGCTTCTT CATGCACGCG
CTGGTGGTCA ATCACTACAT GGGCGGGGGC GCGTATCCCG TGGGCGGCGC GTCGCGCATC
GCCGAGACCA TCATCCCCGT GATCGAGCGC GCGGGCGGCG CGGTGCTGGT CTCGGCCGAG
GTGACCAAGG TGCTGATCGA GAAGAACCGC GCGCACGGCG TGGAGCTGGC CGATGGCACC
TGCGTGTACG CGCCGCAGGT GATCAGCGAC GCCGGCGTCA TGAACACCTT CGCTCGCCTG
GTGCCGGCCG AGGACGCCGA CCGCCACGGC TTTGACCGCC AGCTCGCCGA GCTCGAGCCC
TCGGTGGCGC ACGCCTCGCT GTACCTGGGG TTTCGGCAGA CGGCCGCCGA GCTGGGCCTG
CGCAAGAACA ACCTGTGGGT CTATCCCGAC TACAATCACG ACCGCAACGT CGAGCGCTTT
TTGCACGACA AAGCGGCGCC CCTGCCGGTG GCGTATCTGT CCTTTCCCTC GGCCAAGGAC
CCGGATTTCG AGAATCGCCA CCCCGGCCGG GCCACGGTCG AGGTGGTCAC GCTGGCGCCG
TATCGCTGGT TTGCCGAGTG GCAGGACACG CGCTGGAAGA AGCGCGGCGC CGAGTACGAG
CAGCTCAAGA AGGACCTGAG CGAGCGCATG CTGGCGCCGC TGCTGGCCCA GTATCCGCAA
CTCGCGGGCC AGATCGACCA CTGCGAGCTG TCGTCGCCGC TCACCACGCG CCACTTTGCG
CACTTCAGCC GCGGCGAGAT CTACGGCGTC TCGCACACGC CGCAGCGCTT CGAGCAGCGC
TGGCTGCGCC CGGCGACCCC GGTCAAGGGC CTGTACCTCA CCGGGGCCGA TGTCTGCTCG
GCCGGGGTCG GCGGCGCGCT GTTCGGTGGC GTGCTCACCG CGTCGTCGAT ACTGCGCAAG
AACCTGATCA ACGTGATCGC GCGCCGCCCG CCCGCGGCCG AGGCGTCTGC CGAACCCGTG
CGCGCGGCCG CATAG
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| Protein sequence | MKIGRSYKQH GIEGSYDAIV IGSGIGGLTA AALLAKHGGK KVLVLERHYT AGGFTHSFSR
PGYEWDVGVH YIGQTQPRTL LRRAFDELSD GQLAWADIGD GYDTIVVGDE RYPFPAGRER
WRQAMHGWFP REHAAIDRYI ELIRESARDS QLFFAEKVLP RPLSGTVGGV LRRKAMRLAR
RTTREVLSEL TSDERLIGVL TGQYGDYGLP PAESSFFMHA LVVNHYMGGG AYPVGGASRI
AETIIPVIER AGGAVLVSAE VTKVLIEKNR AHGVELADGT CVYAPQVISD AGVMNTFARL
VPAEDADRHG FDRQLAELEP SVAHASLYLG FRQTAAELGL RKNNLWVYPD YNHDRNVERF
LHDKAAPLPV AYLSFPSAKD PDFENRHPGR ATVEVVTLAP YRWFAEWQDT RWKKRGAEYE
QLKKDLSERM LAPLLAQYPQ LAGQIDHCEL SSPLTTRHFA HFSRGEIYGV SHTPQRFEQR
WLRPATPVKG LYLTGADVCS AGVGGALFGG VLTASSILRK NLINVIARRP PAAEASAEPV
RAAA
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