| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3003 |
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| Symbol | |
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| ID | 8545391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4157656 |
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| End bp | 4160412 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646387675 |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003267403 |
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| Protein GI | 262196194 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.102792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.46573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTAT TCGGCAAGAA CAAGCTGCCC ACGCTCTATC AGACCGAGAG CAGCGAGTGT
GCGCTCGCCT GCCTGGCGAT GGTCGCCGGC TATCACGGCC TCGACATCTC CATGCTCGAG
CTGCGCGAGC GCTTTCCCAT CTCGATGAAG GGCGCCACCC TGCGCGACGT GGTCGAAGTC
GCCAACCAGA TCGGCTTCTC GTCGCGACCG GTGCGCTGTG AACCGGCCGG TCTGCGGCGC
ATCGCGCTAC CGGCCCTGCT GCATTGGGAC TTCGAGCACT TCGTGGTGCT CGAGCGCGCC
GACAAGCGCG GCTATCGCAT CCACGACCCC GCCATCGGTG TCGTCCATCT ATCCGAAAAC
GAGCTATCCG ATCATTTCAC CGGCGTCGCC GTCATCCTGT CACCGACCGA CGACTTTGCC
GGCGGCGAAC TCGGCGAGAA ACTATCGCTG TGGCAACTGC TCAAACGCTC GCGCGGGATG
GTGCCGTTTG TGGCCCAGGT CCTGTGGCTC ACGGCGTTTC TCGAGCTCTT CGCGCTGCTC
GGGCCGCTGT TCCTCAAAGA GGTCATCGAC ACCGGCCTGG CCCATCGCAG CTTTGACCTG
ATCACGGCCA TCGCCGTCGG CATCGGCGCC ATCGGCCTGT TCCAGGGGCT GCTGTCGTTC
TTGCGCGACT ACGTCATTCT GTATTTCGGC ACGTCCTTCA ACCAGCAGAT GATGAATAAC
CTATTCCGTC ATCTGCTGCG ATTGCCCATG CACTTCTACG AGAAGCGCAT CACGGGCGAT
CTCATCGACC GCTATCAGTC GACCGACGTC ATCCGGCGGG TGTTCACCAG CAACCTGCCC
ACCATCCTGC TCGACGGCCT GGTCACCGTG ATCGCGCTCT CGGCCGTGTT CCTCATCTCG
CCCATCCTGG CCGCGATCGC GCTCGCCAGC TTCGCCGTGT ACCTGGGCAT GCGCATCTAC
TTCTACAGCT CGATGCGCAC GCTGACCGAG AAGGCCGTGC GGGCTCGCTC CGAGGAAAAC
GGCCACGTCA TCGACACGCT GCGCGGCATG CAGCCCATCA AGATCTTCGC CAAAGAGCTC
GAGCGGCTCA ACATCTGGGG CAACTTCTAC GCCCGTCTGA TCAACGCCGA AAAAGACGTC
GGGGTGCTGG CGGCCACGCA GTCGGGGTTC AAGCTGTTCA TCCTGGGCGT GGACACCGCC
CTGTGCGTGT ACTTCGGCGC CAACCTGGTG GCGCAGGGCG AGCTGTCGCT CGGCATCCTG
CTGGCGTTCT TCTTCTACAA GGCGCATTTC ACGCAAAAGT CGGTCAACTT CGCCGAGCGC
CTCATGGACC TGCGCCTCGT CGCCGTGCAC GTGGACCGAC TGTCCGATAT CGCGCTCAGC
GAACCCGAGC AACAGGTCCA GGACAAACAG CCGGTCACGC GCGAGGCGTT CGCCGACTTT
CGCGTGGCGT TTGCCAATGT CGGCTTTCGC TACGCGCCGC TCGAGCCCGA CGTCGTGCAG
GGCGCCTCAT GCGAGCTCCG GCGCGGCGAG TTCGTCGCGC TGGTCGGCCC ATCGGGCGGC
GGCAAGACCA CGCTCTTCAA GCTGCTGCTC GGCCTACTGC AGCCGAGCGA GGGCCATATC
GAGTTCAACG GCACACCGCT GAGCGAGCTC GACATCCGCC AATATCGCCG CCACTTCGGC
GTGGTCATGC AGGAAGATCT GCTGCTGACC GGCACGCTGC TCGACAACAT CGCCTTTTTC
GAGGCCAGCC CGGACGAGAA CAAGGCCCGT CGTTGCGCCG AGATCGCGCT CATCCTCGAC
GAGATCGAGG CCATGCCCAT GAAGCTCAAC ACGCGCATCG GCGACCTCGG CTCGGCGCTC
TCGGGCGGCC AGAAGCAGCG CATCCTGCTC GCGCGCGCCC TCTACGGCGA GCCCGAAGTG
ATGTTGCTCG ACGAGGGCAC CGCCAACCTC GATCAGGCCG TCGAGCGCCA GCTCCTCGAC
AACCTCACCG CGCTGGGCAT CACGTGCATA TCGATCGCCC ACCGACCGGA GACCATCTAT
CGAGCGACCA AGGTGTTGCG GCTGGAGAAT GGTACGCTCA CCGACGTCAC AGATGCCTAC
GCCGATGCGC AGACGCCACC ACAGAGAGAG GAACACGAGA TGAAGGTTCG CTACCTGGAG
CCGCGCCCCA AAAACCACTC CAGCAACGTG GCCCTGCTGA TGAAGCTCTG GGACACACCG
CTCACGGGCG AGCAGCAGGA GCGGCTCGCC CAGACCGCGC CCGTGAAGCA GCAGCGCTCG
GAGTTTGGCA ACCTCAACAA CGAGGGCACG CCCTACCCGT CCCAGAGCTG CCTGGTCGCT
CGCTTCCACC CCGATTTTGA GTCGGTGATC GAACCCGGGG TCAAGGAGCT GCTGGCGGTG
GTGGCCATCG ACCTCGATCT GGTGACGTAC ACGAGCTGTC AGGGGCACCG CTACGAGAAT
CCCGACACCC CGACCGACGA GCGCCACGTG GGTATCATCG CCCGCAGCGC CGAGGAGCAT
CAGCGCGTGC GTGGGCTGTT CGAGGACGTC GCCCGTGAGC TCAACCCGGG CTTGGCCGAC
AGCGCGGTCG AAATCGCCAT CATGGACCAT ACCGTACGCG ACGGCGACAC CATCTACCCG
GCGCTGGATC TCTACCTCAG CCAGCGCGAG GGCCACTCTC TCGAGTCCTA TTTCGCAGAA
CTCGACCAGG CGTCCGACAC GCTCATCACC GCGCTCCGCA GCAGGGCCGA GGCGTAG
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| Protein sequence | MSLFGKNKLP TLYQTESSEC ALACLAMVAG YHGLDISMLE LRERFPISMK GATLRDVVEV
ANQIGFSSRP VRCEPAGLRR IALPALLHWD FEHFVVLERA DKRGYRIHDP AIGVVHLSEN
ELSDHFTGVA VILSPTDDFA GGELGEKLSL WQLLKRSRGM VPFVAQVLWL TAFLELFALL
GPLFLKEVID TGLAHRSFDL ITAIAVGIGA IGLFQGLLSF LRDYVILYFG TSFNQQMMNN
LFRHLLRLPM HFYEKRITGD LIDRYQSTDV IRRVFTSNLP TILLDGLVTV IALSAVFLIS
PILAAIALAS FAVYLGMRIY FYSSMRTLTE KAVRARSEEN GHVIDTLRGM QPIKIFAKEL
ERLNIWGNFY ARLINAEKDV GVLAATQSGF KLFILGVDTA LCVYFGANLV AQGELSLGIL
LAFFFYKAHF TQKSVNFAER LMDLRLVAVH VDRLSDIALS EPEQQVQDKQ PVTREAFADF
RVAFANVGFR YAPLEPDVVQ GASCELRRGE FVALVGPSGG GKTTLFKLLL GLLQPSEGHI
EFNGTPLSEL DIRQYRRHFG VVMQEDLLLT GTLLDNIAFF EASPDENKAR RCAEIALILD
EIEAMPMKLN TRIGDLGSAL SGGQKQRILL ARALYGEPEV MLLDEGTANL DQAVERQLLD
NLTALGITCI SIAHRPETIY RATKVLRLEN GTLTDVTDAY ADAQTPPQRE EHEMKVRYLE
PRPKNHSSNV ALLMKLWDTP LTGEQQERLA QTAPVKQQRS EFGNLNNEGT PYPSQSCLVA
RFHPDFESVI EPGVKELLAV VAIDLDLVTY TSCQGHRYEN PDTPTDERHV GIIARSAEEH
QRVRGLFEDV ARELNPGLAD SAVEIAIMDH TVRDGDTIYP ALDLYLSQRE GHSLESYFAE
LDQASDTLIT ALRSRAEA
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