| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2993 |
|---|
| Symbol | |
|---|
| ID | 8545381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4145266 |
|---|
| End bp | 4146186 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646387666 |
|---|
| Product | NmrA family protein |
|---|
| Protein accession | YP_003267394 |
|---|
| Protein GI | 262196185 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0106693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0973127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGA GCGTCCTGGT CACCGGCGCG GCTGGCAACG TCGGCCAGCA TGTCGTACGC
CGCCTTCTCG AACGAGGTAT CGAAGTCGTC GCCGCCAGCT ACCACGAGTC GCGAATTCGC
GACCTGTTCG GGGATACGGT GGCCGCAACG CGGCTCGACT TCCTCGACAG GGCGACGTGG
GCGGACGCGC TCGGCGGCGC GGCGCACATG TTCCTGGTGC GGCCGCCCGC CATCGCCGAC
GTTCGACGCA GCCTCAACCC CTTCGTCGAC TTCGCGCGGG CACACGGCGT CGACCACGTC
GTGTTTCTGT CCGTCGCAGG GGCCGACAAG AACAACGTCG TCCCGCACCG CAAGGTCGAG
GACCACCTGC GAGCCCGCGG CGATCACCAC ACGAACCTGC GACCGGGCTT CTTCGCGCAG
AACCTCCAGA CCGCCTACCG CGAGGACATC GTCCTCGACG ACCGGATCTA CGTGCCCGCG
GGTCGCAGGC AGCCGGTCAA CTGGATCGAC GCTCGGGACA TCGCCGAGGT AGCGACGCTC
GTGCTCGCCG ACCCCGAACC CCACCGTGGA CAGAATTACC TGCTCACCGG CCCGGGCGCC
GTCCTGTGGT CGGAGGTCAG CGACTCGCTG AGCTCTGCTC TCGGCCGACC CATCCGCTAC
GACCCGGCTT CGGTGCTGGG CTACATCTGG CACCTGTCGC GGCGCGGCCT GCCGCGAGGC
GCGATCATGG TGCAAACGAT TCTGCACGTC CTCTTGCGCT TTGGTCAGGG GGCCATCGAG
GATCCCACCC TCGAACAACT GCTCGGTCGC CCGGGTCGAA GCATCCGCCA GTACATCGAG
GACCACGCCG ATCTCTGGAC CAGACCCGGC GACAACCCGC CCCCTCTACC TCGTCGCCAC
AGGCACAAGA CACGCCGGTA A
|
|---|
| Protein sequence | MTGSVLVTGA AGNVGQHVVR RLLERGIEVV AASYHESRIR DLFGDTVAAT RLDFLDRATW
ADALGGAAHM FLVRPPAIAD VRRSLNPFVD FARAHGVDHV VFLSVAGADK NNVVPHRKVE
DHLRARGDHH TNLRPGFFAQ NLQTAYREDI VLDDRIYVPA GRRQPVNWID ARDIAEVATL
VLADPEPHRG QNYLLTGPGA VLWSEVSDSL SSALGRPIRY DPASVLGYIW HLSRRGLPRG
AIMVQTILHV LLRFGQGAIE DPTLEQLLGR PGRSIRQYIE DHADLWTRPG DNPPPLPRRH
RHKTRR
|
|---|
| |