Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2991 |
Symbol | |
ID | 8545379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4143072 |
End bp | 4143974 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646387664 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003267392 |
Protein GI | 262196183 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0194845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0299844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAGT GGCTGAACTA TCACCACCTC TTGTACTTCT GGACCGTAGC CCGTGAGGGC TCGATCGTGC GCGCCAGCCG AGTCTTGCAT CTGGCCCAGC CGACGATCAG CGGTCAGCTT CGCACGCTCG AGGATTCGAT CGGTGAGAAG CTCTTTGCCC GCGTTGGACG CAACCTCGAG CTGACCGAAG TCGGGCAGAT GGTCTACCGC TACGCAGACG AGATCTTCAG CCTCGGTCGC GAACTCCAAG ATACGCTCAA GGGTCGCCCC AGCGGCCGTC CGCTCAAGCT GCACGTGGGT GTTGCCGACG TTTTGCCCAA GCTGCTCGCG CACCGACTTC TCGGCCCTGC GCTCGAGATG GAGGAGCCCG TGCAGATCAT ATGTCGAGAG GACAAAACCG AACGCCTCCT GGCTGAGTTG GCCATCAACG GCCTGGATCT CGTCCTGGCC GACACCCCCA TCGCGGGCAA CGCCCGGGTC AAAGCATACA ATCACCTCCT GGGCGAGTGC GGCCTCAGCT TTCTGGCCAC CGCGGCCTTG GCGCGGCGGT ATCGGAGCAA GTTCCCCCAC TCCCTCGACG GCGCGCCGAT GTTGCTGCCA ACCGAGAACA CCCTCCTGCG ACGCAGCATG GATCAGTGGT TTGATACCAT CGACGTCCGA CCGCAAATCG TCGCCGAATT CGAGGACAGC GCGCTCCTCA AGGTTTTCGG ACAACAAGGC GCCGGGATCT TCGCGGTGCC GAGCGCGGTC CAGGATGAGG TCATCGAGCA CTATCAGGTG CGCGCTCTGG GCAGCACAGA CGCGGTCAAA GAGCGCGTCT ATGCGATCAC GGTGGAGCGC CGGATCAAAA ACCCGGCAGT GGCTGCCATC TCGGCGCGGG CCCGCGCTGA GATGTTTCAA TAA
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Protein sequence | MTEWLNYHHL LYFWTVAREG SIVRASRVLH LAQPTISGQL RTLEDSIGEK LFARVGRNLE LTEVGQMVYR YADEIFSLGR ELQDTLKGRP SGRPLKLHVG VADVLPKLLA HRLLGPALEM EEPVQIICRE DKTERLLAEL AINGLDLVLA DTPIAGNARV KAYNHLLGEC GLSFLATAAL ARRYRSKFPH SLDGAPMLLP TENTLLRRSM DQWFDTIDVR PQIVAEFEDS ALLKVFGQQG AGIFAVPSAV QDEVIEHYQV RALGSTDAVK ERVYAITVER RIKNPAVAAI SARARAEMFQ
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