| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2970 |
|---|
| Symbol | |
|---|
| ID | 8545358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4096860 |
|---|
| End bp | 4102385 |
|---|
| Gene Length | 5526 bp |
|---|
| Protein Length | 1841 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 646387647 |
|---|
| Product | Beta-ketoacyl synthase |
|---|
| Protein accession | YP_003267375 |
|---|
| Protein GI | 262196166 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3321] Polyketide synthase modules and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000966236 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGAGCACGC TGAAACGAGT ACTGAACGCG CTCGAGCAGG CCGAGGAGAC GATCGCGGCC
TTTGAGCGGC GCCGCGACGA GCCCATCGCC ATCATCGGCC TGGGGTGTCG GCTGCCGCGC
GGGCGCACTC CGGATGCGTT CTGGCGCGCG CTCGACGACG GCGTGGACGC GGTGTCCCAA
ATCCCGGCGA CGCGGTGGCC GCAGAAGGGC GCCCTGCACA AGGCGCGCTG GGCGGCCCTG
CTCGACGACG ACCAAGCCAC CGGCTTCGAC GTCGGGTTTT TCGGCATCTC GCCGGCCGAG
GCGGCGGCCA TCGATCCCCA GCAGCGGCTG CTGCTCGAGG TGGCGGTCGA GGCGCTCGAG
GACGCCGGGC TGCCGCTCGC CTCGGTGCGC GGCGCGCGCG CCGGCATGTT CGTCGGCATG
ATGACGCTCG ACTACCAGCA GATGTCGATG GCGCGCCCGG CCGAGCGCTT CGACATGCAC
ACGGCCACCG GCATCGGCGC GTGCTTCAGC AGCGGCCGGC TGTCGCATCT GCTCGGGCTC
GAGGGGCCCT CGGTGGCCAC CGACACCGCG TGCTCGTCGT CGCTGGTAGC TCTGCACATG
GCCGCCCACA GCCTGCGGGC GCGCGAGTGC GAGCTGGCCC TGGTCGGCGG CGTCAACCTG
CTGCTGTCGC CCAAGACCAT GCACCTCTAC GTCAACCTGC ACGCGCTCTC GCCCGAGGGC
CGCTGCCGCA CCTTCGACGC CCGCGCCAAC GGCTTCGTGC GCGGCGAGGG CTGCGGCGTG
CTGGTGCTCA AGCGCCTGTC GGACGCGCTG CGCGACGGCG ACTCGATCCG GGCGCTGGTG
CGCGGCTCGG CGGTCAACCA CAACGGCGCC TCGAGCGGCC TGATCGCGCC CAGCGTGCCG
GCCCAGCGCG CGCTGCTGAG CCAGGCGCTG GAGGCCGCCC GGGTGCGGCC CGAGGACATC
GGCTACGTCG AGGCCCACGG CATCGGCACG GCGCTCGGCG ACGCGGTCGA GATCGAGGCG
CTCAAGGCGG TGCTGGGCGG CGAGCGCGGC GACGGCTCGC GCTGCGTGCT GGGCTCGGTC
AAGACCAACA TCGGCCACCT CGAGGCCGCC GCCGGCATCG CCGGCATCAT CAAGACCGTG
CTCGCGCTCG AGCACGAGCG CATCCCGCGG CACCTGCACC TCGAGACCCT CAACCCGCGC
ATCGACCTGC GCGGGCAGGC GCTCGACATC GCCACCACGG CCCGCGCCTG GCCGCGCGGC
GAGCGGCCGC GGCGCGCCGG TGTGAGCGCG TTCGGGCTCA GCGGCACCAA CGCCCATGTG
ATCCTCGAGG AGGCGCCCGC GCCGGCCGGC GCGGAAGCGG CCACGGACGA CGGGCGGCCG
CGCGTGGTGC TGGTGAGCGC GCGCAGCGAG GCCGGCCTGC GGGCCCTGGT CGCGCGCTAC
GCCGAGCATC TGGCGGCGCC GTCCGCGCCC GCGCTGGCCG ACGTCGCCCA TACCACGGCG
ACCCGGCGCA GCCATCACCC GCACCGCCTG GCCGTGGTCG CTCGGCGCAG CGACGAGGTC
GCCGCGCGCC TGCGCGACTG GCTGGGCGGC GCCGACGGGC CCGCGCTGCA CGCCGGCCGC
GCGGCGCCCG CGGGCGCCGC CGTGATCTTC CTGTACGCCG GCGAGGCGGC CGACGCCGGC
TGGCTCGACG CCGACGCGGG CGCGCGCCCC GAGGCCTTCG AGCAGGCCCT GGCGCGCTGC
CAGGAGGCCT TCGCCGCGCT GGGCTGCAGC GAGCCGCTGC CGGCGCTCGC GCGCTCGCCC
GATCGCGGGC GCGCCGAGCT GGCGCTGCTG GCCGGACACA TCGCGATGAC CGCGGCCTGG
CGCGCCCTCG GCGTGACCCC GGCGCGCGTC GTCGGCGCCG GGGTCGGCGA GATCGCGGCC
GCGCACGCGG CCGGCGCGCT GTCGCTCGAG GCCGCCGCGG CCATCGCCTG GCAGCGCAGC
CAGGGCCTGG CCGCGGCCCT GCCGGCCCCG GCCGCCGAGC CGGAGCGGCG CGTGCCCTGG
TTCTCGTCGG TGAGCGGGCG GCGCGTGGAC GGCGAGGGCC CGGGCGCCGA GCACTGGGCG
CAGGCGCTGG ACGGGCCCGC GCGGCTCGCG GAGGCGCTGG CCCAGGCCGT GGGCGAGGCG
CCCGCCGTCG TGGTCCAGAG CCAGGCCTCG GCCGCCGCCG ACGCCGCGAT AGCTCAGCTC
CCCGCGTCCG CCCGGGTGGT CGCGATCGCC AGCGCGCGCG CCGGCGCGCC CGTGCAGCAG
CGCCTGCACG AGGCCCTGGC CGCGCTGTAC GTGGCCGGCG GCGTCATCGA CTGGAGCCGG
GGCCCGCAGG CGCGCGGTCG CCTGGCGCGC CTGCCGAGCT ACCCGTGGAC GCATCAGCGG
TGCTGGATCG ACGACGGCGC GCGGGCGGGC GCGGCGGGGG CGGCGGCCGG CGCCAGCTCG
GACAGCGCCC GCGCGGCCGA GCGCGAAGAC GGCGCGCGCC GCGCCTCGCC GCTGCTCGCC
CAGCGCTGGG AGCCGCGCGC CGAGGCGGCC TCGCCCGCGC GCGATGAGCG CCCGGGCGGG
ACCTGGCTGG TCGTCGGCGA CGGCGGCGCG CTCGCCGAGC GCGTGGCCGC CGGCCTGCGC
GCGGCCGGCC AGGAGGTGCG CGCGTGGCGC TGGCCGGACG CGGCCGGCCA GGGCCCGGAC
GCGGGGGCCG CGGCGCTCGC CGAGGCGCTG AGCGCGCTCG CGTCCGGCGA CGCGCGCGGC
GTCGCGGTGT GCGCGGGCGC GCCGGACGCG CCTGCCGACG CCGACGCCGG CGCGGCCTGG
CAGGCGCGCG TGGCCGAGGA CTGCCAGCGC CTCGAGCGCC TGGCTCAGCT CGTGGCCGGG
CAGCGCTGGC GCCGCGAGGC GCCGCGGCTG TGGCTGCTCA CCGAGGCCAC CCAGCCCGTT
CCCGCCGCCG CCGCCGACGA CGACGACGAC GGCGACGACG CCGACGCCGC GACGCTGCGC
GGGGCGGCGC TGTGGGGCGT GGCGCGGACC ATCGCGCTCG AGCTCCCGGA GCTGCGCTGC
ACGCGCCTCG ACCTCGACGC CGGCGCCGAC CCCGCGCGCG CGAGCGCGGA GCTGCTCGGC
GAGGGCGCGG ACGAGGAGCT GGCGCTGCGC GGCGGCGTCT GGCATGTCGG CCGCCTGGCG
CCCGTCGATC GCGCGGCCCA GCGGACCCAC CGCGGCCCGG CCCGCGGGCG ACCCTACCGC
ATCGAGCTCG AGCGCGCCGG CATCCTCGAT CAGATGCGCC TGCGCGAGTT CCCGACACCG
CAGCCCGGCC CCGGCCAGGT GCGCGTGCGC GTGATCGCGG CCGGCCTCAA CTTCATGGAC
GTGATGACCG CGATCGGCAT CTACCCGGGC GCCAACACCG GCGGCCTCGA GCCGGTCGTG
CTCGGCGGCG AGTGCTCGGG CGTGGTCGAC GCGCTCGGCC CCGGCGTCGA CTCGCTGGCC
GTGGGCGACC CGGTGGTCGC GCTGGGCCGG GGCTGTTTCG GCTCGCACAT GGTCACCGAG
CTGGCCTACG TGCAGCCGCT GCCGGCGGGC CTCGATCCGG TGCTGGCCGG CGGCGTGCCG
ATCGTGTTCC TCACCGCCTG GTACGCGATG GTCACGCTGG GCCGGCTGCA GCCCGGCGAG
CGCGTGCTCA TCCACTCGGC GGCCTCGGGC GTGGGCCTGG CCGCGGTGCA GATCGCGCAG
CGCCTGGGCG CCGAGATCCA CGCCACCGCC GGCACCGAGG ACAAGCGCGC GCTGCTGCGG
CAGATGGGCG TGGCCTCGGT CATGGACTCG CGCTCTCTGG ACTTCGCCGA CGAGGTGCGC
GCGGCCACCG GCGGCGAGGG CGTGGACATG GTGCTCAACG CGCTCTCGGG CGCGGCCATC
GAGGCCAGCC TGGCGGCGCT GGCGAGCGAC GGCCGGTTTC TCGAGATCGG CAAGACCGAC
ATCTACGACC CCGAACGCGC GCTGGGGCTG GCGCCGTTCC GCAGGCGCAT CTCGTACCAC
GCCGTGGATC TGCTGGGCAT GGCCCAGGAG CGCAAGCAGC GCTTCGCGGC GCTGTTCGGC
GAGGTCATGG CCGGGTTCGC CGCGGGCGAG CTGCGGCCGC TGCCGAGCGC GCGCTTCGCC
GCCGCCGACA CGCTCGAGGC GTTCGCCCAG ATGGCGGGCG GTCGCCACAG CGGCAAGCTG
GTGGTGGTGT TCGAGGGCGC CGCGCCCGAG GTCGAGCGCT CGGCGTTGCC CGAGATCGAC
GCCGCGGCCA GCTATCTCAT CACCGGCGAG GCCGACGCGC TCACGCTGGC GCTCGCCGAG
TGGCTGGCCG GGCAGGGCGC GCGCCACCTG GTGTGGCTGA GCGAGCGGGG CCTGGAGGCT
GGCACGCACG CGGGCGCGGG CGAGCGGCTG GCCGCGCTGC GCGCGCGCGG GGTCGGGCTG
CGCGCGCTGC GAGGCGACGT CGGGCGGGCG GCCGAGGTCG CCGCCGCGGT GGCCGCGGCC
GAGGCCGCCG GGCCGCTGCG GGGCGTGATC CACGCGGCCG GCGCGGTGGT CGGTGCGGCG
CCCGCCGACG CCGACGCCGA CGCCGACGCC GACGCGGCGC TGCGCGCGAG CGTGGCCGGG
GCCTGGCACG TGCACCGCGC GAGCGCGGCG GCCGCGCTCG ACTTCTTCGT CACCTGCTCG
TCGGCCGCGG CCCTGCTCGG GGCGCCCGGG CGCGCGCGCG AGGCCGCGGC CGGGGCCGCG
CTCGACGGCC TGGCCCGCTG CCGGCGGCGG CGCGGGCTGG CGGCCGCGAA CCTGCACTGG
GGGCCGGTCG CGGACCCGGG CGCGCGCGAG GCCGCGGCCG CCACCGGCGG CGTCTTCCGC
CTGGCCGCCG ACGAGCCCGG CCCGGCGCTG CGCGCGCTGC TGGCGGCCGA GCGCGAGAGC
GCGGGCGCGG TCCGCGTGCA CGGCCGCCAC CTGCTCGAGT ACTACCCGCA CCTGGCCAGC
GGCAGCCGCT TCGCGCCGCT CCTGGGCGGC GGCGAGGACG CCCAGGCGGG CGGCGACCGC
GCCTGGCTGG CCGGCTTCGC CGCGGCCGGC GAGGCCGAGC GCCCGCGCCT GATCGAGCAG
CGGGTGCTCG ACGAGCTGTC CGAAATCCTC CGCCGCGAGC TGTCCCGGGT CGAGCCCGAG
CAGCCCTTCA AGTCGCTGGG CGTGGACTCG CTGATGGGCC TGGAGCTGCG CAACCGGCTC
GAGGCGGCGC TGGGGATCGC GCTCTCGGCC GCGCTGCTGT GGGCGTACCC CGACATGGGC
TCGCTGCGCG CCTACCTGCA CGAGCGCCTG CGCGGGCGCG TCGCGGCCCC TGCGCTCGAC
GGCGCGGCAG ACGGCGATAC GTCGGATTCT GTCTCGCTGG ACGATGGTGT CCAGTTGGAC
GAAAACATGT CGCCGGTCGG CGTCGACGCC GCGGCGCCAG CGCCGGCGCC GGGCGAGCCG
TTGGAGCAGC AGCAGGCCGA GCAGTTCGAG CGCGAGCTCG CCGAGCTCGA GCGCCTGTTG
CAGTAG
|
|---|
| Protein sequence | MSTLKRVLNA LEQAEETIAA FERRRDEPIA IIGLGCRLPR GRTPDAFWRA LDDGVDAVSQ
IPATRWPQKG ALHKARWAAL LDDDQATGFD VGFFGISPAE AAAIDPQQRL LLEVAVEALE
DAGLPLASVR GARAGMFVGM MTLDYQQMSM ARPAERFDMH TATGIGACFS SGRLSHLLGL
EGPSVATDTA CSSSLVALHM AAHSLRAREC ELALVGGVNL LLSPKTMHLY VNLHALSPEG
RCRTFDARAN GFVRGEGCGV LVLKRLSDAL RDGDSIRALV RGSAVNHNGA SSGLIAPSVP
AQRALLSQAL EAARVRPEDI GYVEAHGIGT ALGDAVEIEA LKAVLGGERG DGSRCVLGSV
KTNIGHLEAA AGIAGIIKTV LALEHERIPR HLHLETLNPR IDLRGQALDI ATTARAWPRG
ERPRRAGVSA FGLSGTNAHV ILEEAPAPAG AEAATDDGRP RVVLVSARSE AGLRALVARY
AEHLAAPSAP ALADVAHTTA TRRSHHPHRL AVVARRSDEV AARLRDWLGG ADGPALHAGR
AAPAGAAVIF LYAGEAADAG WLDADAGARP EAFEQALARC QEAFAALGCS EPLPALARSP
DRGRAELALL AGHIAMTAAW RALGVTPARV VGAGVGEIAA AHAAGALSLE AAAAIAWQRS
QGLAAALPAP AAEPERRVPW FSSVSGRRVD GEGPGAEHWA QALDGPARLA EALAQAVGEA
PAVVVQSQAS AAADAAIAQL PASARVVAIA SARAGAPVQQ RLHEALAALY VAGGVIDWSR
GPQARGRLAR LPSYPWTHQR CWIDDGARAG AAGAAAGASS DSARAAERED GARRASPLLA
QRWEPRAEAA SPARDERPGG TWLVVGDGGA LAERVAAGLR AAGQEVRAWR WPDAAGQGPD
AGAAALAEAL SALASGDARG VAVCAGAPDA PADADAGAAW QARVAEDCQR LERLAQLVAG
QRWRREAPRL WLLTEATQPV PAAAADDDDD GDDADAATLR GAALWGVART IALELPELRC
TRLDLDAGAD PARASAELLG EGADEELALR GGVWHVGRLA PVDRAAQRTH RGPARGRPYR
IELERAGILD QMRLREFPTP QPGPGQVRVR VIAAGLNFMD VMTAIGIYPG ANTGGLEPVV
LGGECSGVVD ALGPGVDSLA VGDPVVALGR GCFGSHMVTE LAYVQPLPAG LDPVLAGGVP
IVFLTAWYAM VTLGRLQPGE RVLIHSAASG VGLAAVQIAQ RLGAEIHATA GTEDKRALLR
QMGVASVMDS RSLDFADEVR AATGGEGVDM VLNALSGAAI EASLAALASD GRFLEIGKTD
IYDPERALGL APFRRRISYH AVDLLGMAQE RKQRFAALFG EVMAGFAAGE LRPLPSARFA
AADTLEAFAQ MAGGRHSGKL VVVFEGAAPE VERSALPEID AAASYLITGE ADALTLALAE
WLAGQGARHL VWLSERGLEA GTHAGAGERL AALRARGVGL RALRGDVGRA AEVAAAVAAA
EAAGPLRGVI HAAGAVVGAA PADADADADA DAALRASVAG AWHVHRASAA AALDFFVTCS
SAAALLGAPG RAREAAAGAA LDGLARCRRR RGLAAANLHW GPVADPGARE AAAATGGVFR
LAADEPGPAL RALLAAERES AGAVRVHGRH LLEYYPHLAS GSRFAPLLGG GEDAQAGGDR
AWLAGFAAAG EAERPRLIEQ RVLDELSEIL RRELSRVEPE QPFKSLGVDS LMGLELRNRL
EAALGIALSA ALLWAYPDMG SLRAYLHERL RGRVAAPALD GAADGDTSDS VSLDDGVQLD
ENMSPVGVDA AAPAPAPGEP LEQQQAEQFE RELAELERLL Q
|
|---|
| |