| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2951 |
|---|
| Symbol | |
|---|
| ID | 8545339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4016046 |
|---|
| End bp | 4018535 |
|---|
| Gene Length | 2490 bp |
|---|
| Protein Length | 829 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646387630 |
|---|
| Product | methyltransferase FkbM family |
|---|
| Protein accession | YP_003267358 |
|---|
| Protein GI | 262196149 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3321] Polyketide synthase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01444] methyltransferase, FkbM family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.14981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGA CCTCCGAACC CACGAGCGCG ACACCAGCAC ACCTTGCTCT GTTCGCCGCT
ACCAGCCCAA ACCAGCTGAG CGCGGCGTTG GAGAGCGCCG GCGATCCGGC TGCGTTCCCC
GCTGTCGCCA ACGCCTTGAT CGGCATCCAC CAGACGCAGG ACGAACAGGG CGGCGTGCCT
TCCCATCGCG CGGCCCTGCT CCTGACCCAG ACTGGCGCAG CCGTCGTTTC CGGACCGTCG
CCCTCGCCCG CGGCGGCCCA GCAGGTCGCC TTCTTGCTTC CCGGTCTCGG CGACCACTAC
TTGAACATGG GGCTCGACTT GTATCGAACG CTGCCGGTGT TCCGCGAGCA CTTCCAGCGC
TGCGCGGCCT GGCTAGAACC CGAGCTCGGC GTAGATTTGC GTGAGGTCGT ATACCCGAAG
CGCGATGCCG ATGACCCAGA GCCTCGCAAA GCGACCGGCC TCGACCTACG CAGCATGCTC
GGCCGCCGAA CGGCTCCTGA GACCGAGGAG GAGCGACGAC TCAACCAGAT GCGCCTCTGC
CAGCCGGCGC TATTCGCCGT CGAGTATGCA CTCGCCCAGC AGTGGCGAAG CTGGGGTCTC
GCGCCAGAGA TCATGCTGGG GTACAGCTTG GGCGAGTACG TCGCAGCGTG CCTGGCCGGC
GTCCTCTCGC TCGAGGATTC CCTCGCTGTG GTGACCCGCC GCGCCGAACT GATCGAGGAA
CTGCCACCGG GCGCGATGCT CGCCGTGACG CTGTCCGAAG AGAGTATTAC ACCGCTGCTC
GGCACCCATC TCTCGATCTC CGCAGTCAAC GGCCCCGAGT TCTGCGTGGT CTCCGGGCCG
GAAGAGGAGA TCACGCAACT GGAGCAGAAG CTGCGCGCAG CCGCCGCGAC AACGCGCCGC
GTCCGCAGCA CCCACGCCTT TCACTCCAAG ATGATGGAGC CGATCGCCGA CCGCGTCACC
GCCATCATGC GCGGTATGCG CTTGCGTGCT CCCAGCATCC CCTATGTCTC CAACGTCACA
GGCGCCCTGA TTCGTGCCTC TGAAGCGACG GATCCCGCCT ACTGGGCGGC ACACCTCTGT
CAACCCGTGC GCTTCATGCA GGGTCTCTCT GCGCTCAACG CACCGATCCT GCTCGAGGTC
GGTCCCGGTC AAACGCTGTG TAGTCTGGCG AGCGCCGCGC TTGCTACCCG CAGCGAACCA
AGCAGCGCGG TCGCCTCCAT GCGCCACGCC TATGACCCAG ACTCGGATAC CGCCGTACTG
CTCCGAGCGG TGGCAGGTCT GTGGACCCGC GGCGCCAAGC TCGATTGGGA GCGCTTCCCC
AGCGACTCGC TCATTTCTTC CAATACCCTC GAGAACCAGC CACGCGAACA ACAGCAGGCC
GCTCGCCCGC CCGCAACCCA GACCGAACGG CTTCTCGCGA CCTTCTGGGA GGAACTCCTC
AAATGCGAGC CGCCCGCCGC CGATGCGCAC TTCTTCCAGC TCGGTGCAAA CTCCCTCGTC
GCGACACGCT TGATCGACCG GGTTCACAAA GCTCTTCGAG TGCGCTTGCC GCTGCGAGAA
GTTTACGAGA ATCCCACCCT CGAGCGCATG GGGGCCGCCA TTGACGCCCT CTCGCGTCGG
ACGAGCGCAC GGTCTGCACG CCGCCCCGCC CCCGCCCCGG AGCGATCCCG CTCGGTGCCC
CGCCCCGCCC CGAGTGTCGC GCCGAAGCTG TTCACCCTGC CGAATGGCCT CCGCGTGAGC
CACCAGAACG AGGCCGAAAC TCGCCACTTC TACGACGACA TCTTCGTGCA TCGCACGTAC
GCCAAGAACG GCATCCAGAT TCGCAACGGT GCTTGCGTGC TGGACGTAGG AGGCAATATC
GGACTGTTTA CGCTGTTCGC CCACCGCCAG GCCACCGGCG TCCGCGTGTT CATGTTCGAG
CCGGCACCGG CGCTCTTTGC GATTGCGAAA GAGAACGTGG CCCGCCACGG CATCCGTGCG
ACGGTGCTCA ACTTCGGCCT CTCCAACCGC GATGAGCACG CCTCGTTCAC GTTCTACCCA
CACAGCGCCG GCATGTCCTC CTTCCACGCC GACAAGGCCG AGGAACGTCA CAACCTCAAG
ACCATCATCG CCAACCAGCA ACAGGCCGGG AATGCGGAGG CTGCCGGCTT CGGCGCACGC
ATGGATGAGC TGCTGGACGC GCGCTTCACC TCGGTGACGT TCGAGGCGAG GTTGCGCCGC
CTGAGCGATG TCTTGCGTGA GCAGGACATC CAACGCGTCG ACCTGATGAA GGTGGACGTC
CAGAAGTGCG AACTCGAGGT CATCGAGGGC ATCGATGACG CGGACTGGCC CAAGTTTTCC
CAGATCGTAC TCGAAGCCCA CGATGTGAAC GACCGTGTCG CTACGCTGCG CTCTCTCTTC
GCACGGCGCG GCTTCTCGGT CACCGTCGAG CAGGACGAAC TCTACGCAGG AACCAACATC
TACAACATCT ATGCACTACG GAAGGACTGA
|
|---|
| Protein sequence | MTSTSEPTSA TPAHLALFAA TSPNQLSAAL ESAGDPAAFP AVANALIGIH QTQDEQGGVP
SHRAALLLTQ TGAAVVSGPS PSPAAAQQVA FLLPGLGDHY LNMGLDLYRT LPVFREHFQR
CAAWLEPELG VDLREVVYPK RDADDPEPRK ATGLDLRSML GRRTAPETEE ERRLNQMRLC
QPALFAVEYA LAQQWRSWGL APEIMLGYSL GEYVAACLAG VLSLEDSLAV VTRRAELIEE
LPPGAMLAVT LSEESITPLL GTHLSISAVN GPEFCVVSGP EEEITQLEQK LRAAAATTRR
VRSTHAFHSK MMEPIADRVT AIMRGMRLRA PSIPYVSNVT GALIRASEAT DPAYWAAHLC
QPVRFMQGLS ALNAPILLEV GPGQTLCSLA SAALATRSEP SSAVASMRHA YDPDSDTAVL
LRAVAGLWTR GAKLDWERFP SDSLISSNTL ENQPREQQQA ARPPATQTER LLATFWEELL
KCEPPAADAH FFQLGANSLV ATRLIDRVHK ALRVRLPLRE VYENPTLERM GAAIDALSRR
TSARSARRPA PAPERSRSVP RPAPSVAPKL FTLPNGLRVS HQNEAETRHF YDDIFVHRTY
AKNGIQIRNG ACVLDVGGNI GLFTLFAHRQ ATGVRVFMFE PAPALFAIAK ENVARHGIRA
TVLNFGLSNR DEHASFTFYP HSAGMSSFHA DKAEERHNLK TIIANQQQAG NAEAAGFGAR
MDELLDARFT SVTFEARLRR LSDVLREQDI QRVDLMKVDV QKCELEVIEG IDDADWPKFS
QIVLEAHDVN DRVATLRSLF ARRGFSVTVE QDELYAGTNI YNIYALRKD
|
|---|
| |