Gene Hoch_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2947 
Symbol 
ID8545335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4012546 
End bp4013727 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content60% 
IMG OID646387626 
ProductFkbH like protein 
Protein accessionYP_003267354 
Protein GI262196145 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3882] Predicted enzyme involved in methoxymalonyl-ACP biosynthesis 
TIGRFAM ID[TIGR01681] HAD-superfamily phosphatase, subfamily IIIC
[TIGR01686] FkbH-like domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0774889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGTT CTAGCTCGAG CGACGTGAGT CAACAGATGA AGCGCCAGGA CGACAAGAAA 
ACTGTAAAGT GCGTCGTCTG GGATCTGGAC CATACGCTTT GGAACGGTGT GTTGCTCGAG
GACCGACAGG TCACTCTGCG CGAAGAGGTC GTGCAGGTCA TCCGCGACCT CGACCAGCGC
GGCATTCTTC ACTCGATCGC TAGCCGCAAC GACCCGACGG CTGCCATGGC AAAACTCCGC
GAGTTTGGCA TCGCCGACTA CTTTCTCTAC CCACAGATCG GTTGGGGCAA CAAGTCAGAT
AGTCTCAGAG CCATCGCGAA GGCCCTGAAC TTCGGCATCG ACACGTTAGC CTTCGTAGAC
GACCAGCCCT TCGAGCGGGA CGAGGTTCGC TTTGCCCACC CCACGGTCTG CTGCATCGAC
GCCGAAGACG TCGTCGGACT TCCCGCCCGC CCCGACATGA ACCCTAGGTT TGTCACTGAC
GACTCCCGGG TGCGGCGCCA GATGTACCAA GCCGACATCA AGCGCAAAGT CGTCGAGGAC
GCCTACCAGG GCACGCCCAG CGACTTTCTC GCATCCCTCG AGATGCGCTT CGTGATCGGT
GCTGCGGCGG AGGACGATCT GAAACGCGCC GAGGAACTCA CTGTCCGCAC CAACCAGCTG
AATGCAACTG GACACACCTA CTCCTACGAC GAGTTGGCGC ACTTCCGCAA ATCGCCAAAC
CACGAACTCC TGATCGCGTC TCTCACTGAC CGCTACGGAG CGTACGGCAA GATTGGTCTT
GCGCTGATCC AGCGCGAACC CGAGATCTGG ACACTCAAGT TGCTGCTCAT GTCCTGCCGC
GTGATGTCGC GCGGCGTCGG CACCATCCTA CTCAATCACC TTCTACGGTC CGCCAAGGCC
GCCGGCGTTC GTCTCCAGGC AGAGTTTGTC TCCACGGATC GCAACCGTCC AATGTACATC
ACCTACAAGT TCGCAGGGTT CCGTGAGATC TCGCGAGTTG GCAATACGTG CGTCCTGGAG
AATGACTACG TGAACATCCA AGACGATCCT CCGTACATCG AAGTAACGAT CGCGTCGAGC
GCCGCGAACG TTCAAGATGC GCCGCTCCAA CCGGCCTCGG CATCTTCACG CGGGCCGAGC
GCCGCTCTCG CCACCGCTGC CGGAGGACCT GCTCATGAGT GA
 
Protein sequence
MTSSSSSDVS QQMKRQDDKK TVKCVVWDLD HTLWNGVLLE DRQVTLREEV VQVIRDLDQR 
GILHSIASRN DPTAAMAKLR EFGIADYFLY PQIGWGNKSD SLRAIAKALN FGIDTLAFVD
DQPFERDEVR FAHPTVCCID AEDVVGLPAR PDMNPRFVTD DSRVRRQMYQ ADIKRKVVED
AYQGTPSDFL ASLEMRFVIG AAAEDDLKRA EELTVRTNQL NATGHTYSYD ELAHFRKSPN
HELLIASLTD RYGAYGKIGL ALIQREPEIW TLKLLLMSCR VMSRGVGTIL LNHLLRSAKA
AGVRLQAEFV STDRNRPMYI TYKFAGFREI SRVGNTCVLE NDYVNIQDDP PYIEVTIASS
AANVQDAPLQ PASASSRGPS AALATAAGGP AHE