Gene Hoch_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2838 
Symbol 
ID8545226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3889502 
End bp3890311 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID646387527 
Productcation efflux protein 
Protein accessionYP_003267255 
Protein GI262196046 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAGA CAACCTTTCA CATCAAGGAC ATGGACTGCT CGTCGGAGGA GCAGATGATC 
CGGATGCGCC TGGAGGGCAT GGAAGGCATT TCCGGGCTGG AGTTCGATCT CAGCCAGCGG
CGACTCGACG TCTTCCACGA CGGCTCGCCC TCCACGATCG CCGACGTCCT TGCGCCTCTG
AATCTCGGTG CGCGCCAGGT GGAGCACCGA GAGGAGGTCG AGATGCCGAC GGAGGATGAC
GATGCATCCA ACCGTGGGCC CCTCATGTGG GCGCTCGCGA TCAACTTCAC ACTCTTCGTC
GGTGAGCTCG CCGCGGGCCT CCTATCAGGA TCGATGGGCC TGGTCGCGGA CTCCTTGGAC
ATGTTGGCCG ACGCGTTCGT CTACGCGCTC AGCCTCGCCG CTGTTGGCGG GAGCCTCGTA
CGCAAGCGGC GACTCGCCGC CTGGAGCGGC TACCTTCAGG GAGGGCTGGC GTTGCTCGGT
CTCGCCGAGG TCGTGCGGCG CTTCGTAGCG CCGATGGGCG CGCCGGACGT AGGGTCGATG
ATCGTGGTCT CCTTGGTGGC CCTCGCTGCC AATGTGGCGA CCCTGCTCAT CCTGCGCCGC
ACCAAGCGGG GTGAGGCCCA CATCGAGGCC AGCTGGATCT TCACGTCCAA CGACATCAAG
GTGAACGCCC TCGTCATCCT CGCGGGACTC CTCGTCTGGT GGTCGTCGTC GCAGGTGCCC
GATCTCATCG CCGGCGGGTT GATCTTCCTG ATCGTTGCGA ACGGCGCTCG CCGAATCCTC
GCGTTGTCGA AGGGGTCATC GGGGAGGTGA
 
Protein sequence
MNQTTFHIKD MDCSSEEQMI RMRLEGMEGI SGLEFDLSQR RLDVFHDGSP STIADVLAPL 
NLGARQVEHR EEVEMPTEDD DASNRGPLMW ALAINFTLFV GELAAGLLSG SMGLVADSLD
MLADAFVYAL SLAAVGGSLV RKRRLAAWSG YLQGGLALLG LAEVVRRFVA PMGAPDVGSM
IVVSLVALAA NVATLLILRR TKRGEAHIEA SWIFTSNDIK VNALVILAGL LVWWSSSQVP
DLIAGGLIFL IVANGARRIL ALSKGSSGR