Gene Hoch_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2827 
Symbol 
ID8545215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3876818 
End bp3877501 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content54% 
IMG OID646387516 
Producthypothetical protein 
Protein accessionYP_003267244 
Protein GI262196035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.959821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGTT ACTATTTGAC GGGAATAATT TTTTCGGTTT TGATTATTGG CTATTCGTTT 
GAAAGCCAAG CAGACGAGGT CACACCGAAT CTCCACATTG GAGTGGAGGG CGGTGGCATC
GGAGCAACGT TTTCGCGAGC CTCCAGTGAA AACACTTCGG ATTACCTCTA TCGCGGACGG
CTGGCGGGAG GTGTGACCTC GCGGTTTGAG TTTGCCCGTT TCAAAAGCAT GAGCTTTGCT
TTCCGGACAG GGCTTCTCTA CGTGAGCAAA GGCCCGAATG TAGAGTTTGA GGGAAGAGAT
CAAGGGGCTT TCACTCTTAC TTATCTCGAG TTACCTTTCT TTGGGGTAAC AGCCTGGCAA
GCGGCTCCCT CACTCACAGC GTTCGTTGCA GCAGGCCCCT ATCTCGGCAT CGCCCTAGGC
GCGCAGAGTA CAGGTGCAAA TGGAGATGTT CGTGATATCA CGGACTCTAT AGATCCGCTT
GACATAGGCG TAGGGGGAGC ACTCGGCGCG ACCTGGGATT TCGGTGAGCG TTTCGCGTTG
GTGTTGGAAG GAAGATTTGC AGAGGGGATT ACCGACATCG ATAGTACTAG CGACAATCCG
GGCCGTCGGA ACCGAAGTGT TCTTTTGATG GTTGGCCTCG ACTACGAAAT CTGGCGCGCG
CAGGCCACCC CGACGTCGCC GTAG
 
Protein sequence
MIRYYLTGII FSVLIIGYSF ESQADEVTPN LHIGVEGGGI GATFSRASSE NTSDYLYRGR 
LAGGVTSRFE FARFKSMSFA FRTGLLYVSK GPNVEFEGRD QGAFTLTYLE LPFFGVTAWQ
AAPSLTAFVA AGPYLGIALG AQSTGANGDV RDITDSIDPL DIGVGGALGA TWDFGERFAL
VLEGRFAEGI TDIDSTSDNP GRRNRSVLLM VGLDYEIWRA QATPTSP