Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2827 |
Symbol | |
ID | 8545215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3876818 |
End bp | 3877501 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646387516 |
Product | hypothetical protein |
Protein accession | YP_003267244 |
Protein GI | 262196035 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.959821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATACGTT ACTATTTGAC GGGAATAATT TTTTCGGTTT TGATTATTGG CTATTCGTTT GAAAGCCAAG CAGACGAGGT CACACCGAAT CTCCACATTG GAGTGGAGGG CGGTGGCATC GGAGCAACGT TTTCGCGAGC CTCCAGTGAA AACACTTCGG ATTACCTCTA TCGCGGACGG CTGGCGGGAG GTGTGACCTC GCGGTTTGAG TTTGCCCGTT TCAAAAGCAT GAGCTTTGCT TTCCGGACAG GGCTTCTCTA CGTGAGCAAA GGCCCGAATG TAGAGTTTGA GGGAAGAGAT CAAGGGGCTT TCACTCTTAC TTATCTCGAG TTACCTTTCT TTGGGGTAAC AGCCTGGCAA GCGGCTCCCT CACTCACAGC GTTCGTTGCA GCAGGCCCCT ATCTCGGCAT CGCCCTAGGC GCGCAGAGTA CAGGTGCAAA TGGAGATGTT CGTGATATCA CGGACTCTAT AGATCCGCTT GACATAGGCG TAGGGGGAGC ACTCGGCGCG ACCTGGGATT TCGGTGAGCG TTTCGCGTTG GTGTTGGAAG GAAGATTTGC AGAGGGGATT ACCGACATCG ATAGTACTAG CGACAATCCG GGCCGTCGGA ACCGAAGTGT TCTTTTGATG GTTGGCCTCG ACTACGAAAT CTGGCGCGCG CAGGCCACCC CGACGTCGCC GTAG
|
Protein sequence | MIRYYLTGII FSVLIIGYSF ESQADEVTPN LHIGVEGGGI GATFSRASSE NTSDYLYRGR LAGGVTSRFE FARFKSMSFA FRTGLLYVSK GPNVEFEGRD QGAFTLTYLE LPFFGVTAWQ AAPSLTAFVA AGPYLGIALG AQSTGANGDV RDITDSIDPL DIGVGGALGA TWDFGERFAL VLEGRFAEGI TDIDSTSDNP GRRNRSVLLM VGLDYEIWRA QATPTSP
|
| |