| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2788 |
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| Symbol | |
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| ID | 8545176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3824265 |
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| End bp | 3825734 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646387480 |
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| Product | SEFIR domain protein |
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| Protein accession | YP_003267208 |
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| Protein GI | 262195999 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0246678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATG CGATTGAGAG CGATTCAGAA GTTCCTAAGC TGTTTATCTC TTACAGTTGG
ACGAGTGAAG AGCATCAGAA CTGGGTGTTG CAGCTAGCTA ACGACTTGGC CGATAACGGG
GTTCATGTCG TGATCGATAA ATTTGATCTT CGTCCTGGTC ACGATGCGTT TAAGTTTATG
GAGCAAATGG TCACAGATCC TTCAATTTCT AAAGTGCTCA TTGTTTCTGA TGAGGCATAT
GCAACCAAAT CAGATGAGCG CATGGGTGGC GTTGGGATCG AGGCCCAAAT TATAACGCCG
GATGTTTACA AACAGGCCCA GCAGTCAAAA TTTGTAGTGC TAGTGCGTGA ACTTAAACCA
GATGGCCAAC CATGGGTACC TGCATATTAC AATTCGAAGT TGTACATCGA CTGCTCTGAT
CTGAACGAGT ACGAAGAGAA ACTCGAAGAA CTCATTCGCT GGGCCTTCGA TAAGCCGTTG
CATCGGCGGC GTCCGCTCGG GAGGCCACCT GCTTATCTAT TTGAGACGCC CAGTGTCGAC
CTAGGTACTC GGTCAGCTCA ACAACGTTGT GTCAAAGCAA TCCGAAGTGG TGCTCAATCA
GCATCCGGCG CACTAGATGA ATACATCAAC ATCTTTGTCG ACAATTTGGG GCGCTTTTTC
TCAGAAATAT TAGATGAAGA CGATAAGACG GACAGCTCGC CCTCAGAATC GTTCAATAGG
GCGTTGAGAC TATTTCTTCC CTATCGAGAT GAGATGCTTC AGGTGTTTAG TGCTGTGGCT
TCTTGTGCAA CGGTTTCAAA TAATCAGTAT TTGAATACTG CCATTAGATT GTTTGAGAAG
CTGGGCTGCT ACACTAGGGG CACCATGCGC AATCCACGGA ATCGTGCGGA TGTAGATTTG
TTTTCTTTTG TAGTGCATGA ACTATTCTTG TACCTGCTGG CTTTGTTTTT TGAGAAGGGG
CGGTTAGAGG ATATTGATTC AATATTGAGC CATCGATACT ATGTGAGGTG CGACTCTGGT
TCTGGTTATA CGGATGCGTA TTCTTATTCT ATTTTTTACT CGCCTGTCGA AATTCTTTAT
AATCCAAGAG CTTGGGTGGT AGAGGGAGCG CATGCCGCAT TACTTCGCCA GCGTAGCTAT
TCCGGGATAG AATTCAGGTA TGTTATGGAG ATGGATTTTG TTGCTCACCT GAGGTCAGAA
ATCGCGTCCG AGACAAGTGG CGGATGGCAT CCAGTAACTT TGTGCCTCAA AGAGGGTGTT
GAAACGCTGG AAGTATTCCA ACGATCGGTT TCTAAATCCT ACTTTGAACG AGTTCTGTTG
ATGCTCGGTG GCGTGTCGAA GGCTGACATC GAAGCCTACG TAGAGTCTGC TGTGGGCGGT
CGCACGGCGA GACAGATTCC TCTTCAAATA AAAACACCTA GGCATATACA GAATCTTTTT
GATTTAGAAA ATTTAGGTGT GATAAGATGA
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| Protein sequence | MADAIESDSE VPKLFISYSW TSEEHQNWVL QLANDLADNG VHVVIDKFDL RPGHDAFKFM
EQMVTDPSIS KVLIVSDEAY ATKSDERMGG VGIEAQIITP DVYKQAQQSK FVVLVRELKP
DGQPWVPAYY NSKLYIDCSD LNEYEEKLEE LIRWAFDKPL HRRRPLGRPP AYLFETPSVD
LGTRSAQQRC VKAIRSGAQS ASGALDEYIN IFVDNLGRFF SEILDEDDKT DSSPSESFNR
ALRLFLPYRD EMLQVFSAVA SCATVSNNQY LNTAIRLFEK LGCYTRGTMR NPRNRADVDL
FSFVVHELFL YLLALFFEKG RLEDIDSILS HRYYVRCDSG SGYTDAYSYS IFYSPVEILY
NPRAWVVEGA HAALLRQRSY SGIEFRYVME MDFVAHLRSE IASETSGGWH PVTLCLKEGV
ETLEVFQRSV SKSYFERVLL MLGGVSKADI EAYVESAVGG RTARQIPLQI KTPRHIQNLF
DLENLGVIR
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