| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2730 |
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| Symbol | |
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| ID | 8545117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 3755740 |
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| End bp | 3756897 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646387423 |
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| Product | peptidase dimerization domain protein |
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| Protein accession | YP_003267152 |
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| Protein GI | 262195943 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.319557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0559311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC TGCTCGACCG CTCCCTGGAG GCCGCCGCGC GGCGCTGTGA AGAGATGCTG
CCCATGCTCG AACGCTGGGT GCGCCAGAAC TCGTTCTCGG ACGAGGTGGA CAACGTCAAC
GCCATGGGCG CGCTGCTGGC CGAGGATTTC GACCTGCCCG GGCTGTCGCT CGAGCGCGTG
GCCGGCGACG GCGTCGGCGA TCACCTGGTG TGGAAGACTC CGGCGTGGGC GGTCAGCGGC
CACAGCGGCG AGCTGCTCAT CGGCCACCAC GACACCGTGT TCCCGCCCGG CAGCTTCGAG
GTCTGGGAGC GCGAGGGCGA CATCCTGCGC GGGCCCGGCG TGCTCGACAT GAAGGGCGGC
CTGGTCACCA TCCGCACCGC GCTGGCCGCG CTCGCCGACG CCGGCGCGCT CGAGACCGTG
CCGCTGGCCT TCATCTCGGT CGGCGATGAG GAGATCGGCT CGCGCCACTC GCAGGCCACG
CTCGAGGAGC TGTGCCGCGG CGCCCACAAC GCCCTGGTGT TCGAGGCCGG CCGCGCCTCC
GACCTGATCA TCACCCAGCG CAAGGGCACC GGCCGGGTCA CCGCCAAGGT CACCGGCAAG
GCCGCGCACG CCGGCAACCA CCACGCCGAC GGCGTCAACG CCATCTGGGC CGCCGCCCGC
TTTGTCGAGC GCGCCCAGGC GCTCACCGAC TACGACGCCG GGCTGACCGT CAACGTCGGC
CTCATCAGCG GCGGCACCAG CGCCAACACC GTGCCCGCCG AGGCCTCCTG CACCGCCGAC
TTCCGCTTCA TCCGCAAGCC CGACGGCGAA CGCGCCAGCG CCGCCTTCCG CGACATCGCC
GCCGAGATCG CGCGCGACAC CGGCACCCGC ATCGAGGTCA GCGGCGGCGT CCGGCGCCCG
CCCCTGGAGC GCGGCGAGGC CTCGGTGGCC CTGTACCAGG CCTACGCCGA GGCCGCCCGC
GCCGCCGGTC TGGGCGACGG CGAGTGCCCG CTGATCGGCG GCGGCTCCGA CGCCAACACC
GCCAGCACCC ACGGCGTGCC CGCCATCGAC GGCCTGGGTC CGCGCGGCCG CGGCTTCCAC
ACGCACGATG AGTTCATCGA GGTGTCCTCG CTGCGCCTGC GCGTCGAAGC CCTGGTGCGC
TACCTGTGCG CGCGCTGA
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| Protein sequence | MTDLLDRSLE AAARRCEEML PMLERWVRQN SFSDEVDNVN AMGALLAEDF DLPGLSLERV
AGDGVGDHLV WKTPAWAVSG HSGELLIGHH DTVFPPGSFE VWEREGDILR GPGVLDMKGG
LVTIRTALAA LADAGALETV PLAFISVGDE EIGSRHSQAT LEELCRGAHN ALVFEAGRAS
DLIITQRKGT GRVTAKVTGK AAHAGNHHAD GVNAIWAAAR FVERAQALTD YDAGLTVNVG
LISGGTSANT VPAEASCTAD FRFIRKPDGE RASAAFRDIA AEIARDTGTR IEVSGGVRRP
PLERGEASVA LYQAYAEAAR AAGLGDGECP LIGGGSDANT ASTHGVPAID GLGPRGRGFH
THDEFIEVSS LRLRVEALVR YLCAR
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