Gene Hoch_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2712 
Symbol 
ID8545099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3732163 
End bp3733581 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content68% 
IMG OID646387405 
ProductPolysulphide reductase NrfD 
Protein accessionYP_003267134 
Protein GI262195925 
COG category[C] Energy production and conversion 
COG ID[COG5557] Polysulphide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.544038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.344395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCGC CCGTTCTCAT CGGACGACCG TCCGACGCCG AGCTCTCCGA CCAGCTTCTG 
GGCACCACCT GGCGCCCGGG CGGACGCCTG TGGCGGCTGG CCTTTGCCGC CTGCGCCGCC
GGCACCCTGG GCCTGTTCGC GCTCATCGCC TACGTGGTGA GCTGCGGCAT CGGCCTGTGG
GGCAACAACA TCCCGGTGGC CTGGGGCTTT GGCATCATCA ACTTCGTGTG GTGGATCGGC
ATAGGCCACG CAGGCACCTT CATCTCGGCC ATCTTGCTGC TCTTCGAGCA GCGCTGGCGC
ACGTCGATCA ACCGCTTCGC CGAGGCCATG ACTCTGTTCG CCGTGGTCCA GGCGGCGCTG
TTTCCGCTGC TGCATCTGGG CCGGCCGTGG TTTGGCTACT GGCTGTTTCC CTACCCCTCG
ACCATGGACG TGTGGCCCCA GGTCAAGAGC GCGCTGCCCT GGGACGCGGC CGCGATCACG
ACCTACGGCC TGGTGTCGCT GCTGTTCTGG TACCTGGGCC TGCTCCCCGA CCTGGCCGGC
CTGCGCGACC GCTCGCCGAC GCGCGCCCGA CGCCTGATCT ACGGCGTGCT GGCGCTGGGC
TGGCGCGGCA ACCTGCGCAC CTGGCGCCAC TACCGCGCCG CCTATCTGGT GCTCGCCGGC
CTGGCCACGC CGCTGGTCAT CTCGGTGCAC AGCATCGTGA GCAGCGACTT CGCCATCGGC
GCCACGCCGG GCTGGCACTC GACCGTGTTC CCGCCCTTCT TCGTCGCCGG CGCCATCTTC
AGCGGCTTCG CCATGGTGCT CACCCTGCTC ATCCCGGTGC GCGCGGTTTT CGGACTGCAC
CGGGTCATCA CCGAGCGCCA CCTCGACGCC TGCGCCAAGA TGCTCCTGGT CACCGGCTGG
ATCGTCATCT ACGGCTACGC GGTGGAGTTC TTCACCGCCT GGTACAGCGG CAGCGAGGCC
GAGATCTTCC AGTTCTTCGC CGCCCGCCCG AGCGGGCCCA ACGCCGCGGC CTTTTGGCTG
ATGCTCGCCT GCAACGTGCT GGTGCCGCAG CTCTTCTGGT CGCGGCGCAT GCGCCGCGAC
GTGCGCGTGC TGATGGTGGC CGCGCTGCTG ATCAACGTCG GCATGTGGTG CGAGCGCTTC
GTCATCGTGG TCATGAGCCT GCAGCGCGAG TTCCTCACCG CGGCCTGGGG CTCGTTTTCG
CCCACCTGGG TCGATATCGG CATCCTCGGC GGGACCATGT GCTTCTTCGG CCTGCTGCTG
CTCAGCTTCG TGCGCGTGCT GCCCATGGTC TCTGCCGCCG AGGTCAAAGA GCTGGCCCAT
GAGCTGGCCG AGGAAGCGGA GCAGGAGCAG GACGACGAGA ACGGCGACGA AAGCGGCGAC
GACGAGGACA AACGCAGCGA GGAGCGCGAG CATGCGTGA
 
Protein sequence
MSAPVLIGRP SDAELSDQLL GTTWRPGGRL WRLAFAACAA GTLGLFALIA YVVSCGIGLW 
GNNIPVAWGF GIINFVWWIG IGHAGTFISA ILLLFEQRWR TSINRFAEAM TLFAVVQAAL
FPLLHLGRPW FGYWLFPYPS TMDVWPQVKS ALPWDAAAIT TYGLVSLLFW YLGLLPDLAG
LRDRSPTRAR RLIYGVLALG WRGNLRTWRH YRAAYLVLAG LATPLVISVH SIVSSDFAIG
ATPGWHSTVF PPFFVAGAIF SGFAMVLTLL IPVRAVFGLH RVITERHLDA CAKMLLVTGW
IVIYGYAVEF FTAWYSGSEA EIFQFFAARP SGPNAAAFWL MLACNVLVPQ LFWSRRMRRD
VRVLMVAALL INVGMWCERF VIVVMSLQRE FLTAAWGSFS PTWVDIGILG GTMCFFGLLL
LSFVRVLPMV SAAEVKELAH ELAEEAEQEQ DDENGDESGD DEDKRSEERE HA